NNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTGTTACCAAGCACATCCCAGTAACTCTCAGGGTGCTGCTT
TTAATCCTTCAACCCTATGTATGGCAAAAAAATGAAGGGATAGAAAAAAG
TTACTAATATGGAACTATAGAACTATCAGGTATTTATTCTTATGGTATAT
ACTAATATATCTTCAAAGGAAAGCTAGGAGAAGGAATATCACTCTATGGG
ATCAGAAAAGGAAGGGTGTGACTCAAGAGAAGATGATGGTGAAGAAACAG
AGAAAGACAGTGTGATGGACAGGCAAGAAACTATGCACAGAGCTTCAGAA
GGGAACACCACCCTTTATGCATATTCAACATCTTAGGATATGGCCTATCA
TCTGCATGTAATAAAATATATGAAAATTGCATAGGTACATATATGCACAA
ATATATTTATTCATTTTTATGTAGTATATACATAATAGATAGTCATAGTA
ATAATATCATAGCAACAGGCATATGTTTTTTTCCTTTTCATATACTCTTC
TTTTAATTTTTTATTTTATTTTATTTTAATTAGGTATTTTCTTCATTTAC
ATTTTCAATGGTATCCCAAAAGTCCCCCATACCCCCCCCCCACTCTTCTA
CCTACCCACTCCCTCTTCTTGGGCCTGGCGTTCCCCTGTACCGAGGGATA
TAAAGTTTGCAAGAACAATGGGCCTCTCTTTTCCAAGATGGGCCACTAAG
CCCTCTN

NNNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGCTCTGCCTGCATCAT
CCCTGCCTAGATGCTGCCATGCTCCCACCTTGATAATAGTGGACTGAACC
TCTGAACCTGTAAGCCAGCCCCAATAAAATGTTGTCCTTTATTAGACTTG
CCTTGTACATTGTGTCTGTTCACAGGAATAAAACCCTAAGACAGCATGCA
TGGACTGATTCTCTATTTAATACATAGGAGAAATTAAGCTGAACCATAGA
CTTACTCTGCTTCCTGACCATCCAACACTGAGATGAACCGGCTGAATGTT
TTTGCTGCCATGAACTCTAAAAGCCTTCCCCACAAAGTGGACTAGATTCA
CTTAAACTATGGGACAAAATAAATCCCTAATCTTTTAAGTTACTTCCTGT
CAACTATTTGGTTAGTGCCAAGAGAAAAGTAACTGGTATCTACCTATATC
CTGCTTGCTTCCTAACTTCAGGAATTGGTATTCTGAAATCTGTCCAATCA
AATCAACATCCTTCTCTTATGATCCAGAAACAAGGAAATGATGACGGGAC
CTTTCTTCCCAATGCTAAAGGCCAAATTCCTCTTTCCTTTTTTGATTGGA
ACATTTCTGGACTAACATTTCCAACGTTACCCCCTTTCCTGGTTTTCCCT
CAAATTTTTCCCTAACCCTAACCCCCCCCCCTTTATTTTCCTTCCCCCCT
TTTTCCTTT

Query= MSMg01no378_b08.b1 MSMg01no378_b08.b1 CHROMAT_FILE:
MSMg01no378_b08.b1 PHD_FILE: MSMg01no378_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:29 2005
         (559 letters)



>mm_chr15_67689657_67690616
          Length = 960

 Score = 1052 bits (544), Expect = 0.0
 Identities = 553/556 (99%), Gaps = 1/556 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgttaccaagcacatcccagtaactctcagggtgctgcttttaatccttcaacc 64
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 709 gaattctgttaccaagcacatcccagtaactctcagggtgctgcttttaatccttcaaac 650

                                                                       
Query: 65  ctatgtatggc-aaaaaaatgaagggatagaaaaaagttactaatatggaactatagaac 123
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctatgtatggcaaaaaaaatgaagggatagaaaaaagttactaatatggaactatagaac 590

                                                                       
Query: 124 tatcaggtatttattcttatggtatatactaatatatcttcaaaggaaagctaggagaag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tatcaggtatttattcttatggtatatactaatatatcttcaaaggaaagctaggagaag 530

                                                                       
Query: 184 gaatatcactctatgggatcagaaaaggaagggtgtgactcaagagaagatgatggtgaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gaatatcactctatgggatcagaaaaggaagggtgtgactcaagagaagatgatggtgaa 470

                                                                       
Query: 244 gaaacagagaaagacagtgtgatggacaggcaagaaactatgcacagagcttcagaaggg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaaacagagaaagacagtgtgatggacaggcaagaaactatgcacagagcttcagaaggg 410

                                                                       
Query: 304 aacaccaccctttatgcatattcaacatcttaggatatggcctatcatctgcatgtaata 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aacaccaccctttatgcatattcaacatcttaggatatggcctatcatctgcatgtaata 350

                                                                       
Query: 364 aaatatatgaaaattgcataggtacatatatgcacaaatatatttattcatttttatgta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaatatatgaaaattgcataggtacatatatgcacaaatatatttattcatttttatgta 290

                                                                       
Query: 424 gtatatacataatagatagtcatagtaataatatcatagcaacaggcatatgtttttttc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatatacataatagatagtcatagtaataatatcatagcaacaggcatatgtttttttc 230

                                                                       
Query: 484 cttttcatatactcttcttttaattttttattttattttattttaattaggtattttctt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cttttcatatactcttcttttaattttttattttattttattttaattaggtattttctt 170

                           
Query: 544 catttacattttcaat 559
           ||||||||||| ||||
Sbjct: 169 catttacatttccaat 154


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 960
Length adjustment: 10
Effective length of query: 549
Effective length of database: 950
Effective search space:   521550
Effective search space used:   521550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)