NNNNAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAG
GATCCGCGGAATTCAGAGGACTATATACCTCACACAGTCAAGTGGGCAAC
TGACAGGTTTTTTATTTTTTTTAAGGATGTATTTTCAAGTATGTAATCTC
TAACAATCTCTAACACTATTAATAATACTTTGTTATGCTTGCAGACAGGA
ACATGTTGTCCTCTGAGAGGCTTCACCCAGCAGCTGACTCGGACAGATAC
AGAAACCCACAGACAGACAGTGGATAAAGCTTGTCGGGGGTGGGAGGAAG
GGGAGGGGGAGGGTCTTATGNNNNNNNNNTTTTTTTTTTNNNNNTTTNTN
TTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTT
TTTTTTTNTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTNTTT
TTTTTNTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTT
TTTTTTNNNTNTTTTTTTTNTTTTNNTTTTTTTTTTNNTNTTTTTTTTTT
TTTTTTTNTTNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTNTTTT
TTTTNTTTTTTNTTNNTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTT
TTTTTTTNTT

NNNCCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGGTGGAGAGCTTTCC
TGTGAGCCTAAATGATGGAAAAAAGAAAGTTGTACATCTTTTTTCATTGA
TGCCTCTACCGAGGTTTTAAAAATACACACGAGGAAAAGGGTCCTAAGGA
CAACATAAGAGTCAGAGACAACCCCACTTCCATGTCTTTCCCCATGGACT
TCAGGGAATCCAACAGAAGTAGAAGAAGACAAGGAATCAGAGGAAACTAA
GAGATCTAGGACACCAGGATAACACAGACCACAGAACTAACCAAGCAGAC
CTCAAAGGGGCTCACAAAGATGGCAAGAGCAATCAGAGACACATGGATCT
CACCAAGCCCTAATATGAGGGAATGCTCGTAGTCTTATTGTAACTTGTTA
GAATATATTCTGTTGATATCTCTGGAAGCGCTCTCTATTGTGAAGAGAAA
CTGAGGAGAAGTAAGCCTCTGAATTCAGCAGGTGGTGGAGGCAGACCTGG
AGAAATTGAGGGATGGAGAACTGTAGTTGAAATGTATTGTATGACAGATG
AATAAATTTAGAATTGCAAGAATAAATAAATAAATTAAGTAATAAAAATA
AAAACACCCTGGCTGAGTGGATATAGCTAGCACCAACTCCCAGAACAATT
AAAACATGAAGTCTCAGGAAAATTCAACTCATAATAACCTCCCCTTCTT

Query= MSMg01no378_j05.g1 MSMg01no378_j05.g1 CHROMAT_FILE:
MSMg01no378_j05.g1 PHD_FILE: MSMg01no378_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:06 2005
         (524 letters)



>mm_chr15_16144677_16145600
          Length = 924

 Score =  926 bits (479), Expect = 0.0
 Identities = 515/531 (96%), Gaps = 10/531 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagggtggagagctttcctgtgagcctaaatgatggaaaaaagaaagttgtacatctttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagggtggagagctttcctgtgagcctaaatgatggaaaaaagaaagttgtacatctttt 260

                                                                       
Query: 61  ttcattgatgcctctaccgaggttttaaaaatacacacgaggaaaagggtcctaaggaca 120
           | ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 261 tccattgatgcctctaccgaggttttaaaaatacacatgaggaacagggtcctaaggaca 320

                                                                       
Query: 121 acataagagtcagagacaaccccacttccatgtctttccccatggacttcagggaatcca 180
           |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 321 acataagagtcagagacaaccccactcccatgtctttccccgtggacttcagggaatcca 380

                                                                       
Query: 181 acagaagtagaagaagacaaggaatcagaggaaactaagagatctaggacaccaggataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaagtagaagaagacaaggaatcagaggaaactaagagatctaggacaccaggataa 440

                                                                       
Query: 241 cacagaccacagaactaaccaagcagacctcaaaggggctcacaaagatggcaagagcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagaccacagaactaaccaagcagacctcaaaggggctcacaaagatggcaagagcaa 500

                                                                       
Query: 301 tcagagacacatggatctcaccaagccctaatatgagggaatgctcgtagtcttattgta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagagacacatggatctcaccaagccctaatatgagggaatgctcgtagtcttattgta 560

                                                                       
Query: 361 acttgtta-gaatatattctgttgatatctctggaagcgct------ctctattgtgaag 413
           |||||||| || ||||||||||||||||||||||||| |||      ||||  |||||||
Sbjct: 561 acttgttatga-tatattctgttgatatctctggaagtgcttgtgttctct--tgtgaag 617

                                                                       
Query: 414 agaaactgaggagaagtaagcctctgaattcagcaggtggtggaggcagacctggagaaa 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 agaaactgaggagaagtaagcctctgaattcagcaggtggtggaggcagacctggagaaa 677

                                                              
Query: 474 ttgagggatggagaactgtagttgaaatgtattgtatgacagatgaataaa 524
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttgagggatggagaactgtagttgaaatgtattgtatgacagatgaataaa 728


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)