Query= MSMg01no378_k14.b1 MSMg01no378_k14.b1 CHROMAT_FILE:
MSMg01no378_k14.b1 PHD_FILE: MSMg01no378_k14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:12 2005
(557 letters)
>mm_chr15_93089166_93090122
Length = 957
Score = 1000 bits (517), Expect = 0.0
Identities = 544/553 (98%)
Strand = Plus / Plus
Query: 5 gaattcctatgcttacggtgtctctttacagcaacagaaatgctgactaacacatgttct 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattcctatgctaatggtgtctctttacagcaacagaaatgctgactaacacgtgttct 264
Query: 65 gtataaaattaagtttcaaatttaaaaagagatagaaataaagccctgggaaggaaaccg 124
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 gtataaaattaagtttcaaatttaaaaagagatagaaacgaagccctgggaaggaaaccg 324
Query: 125 actcactggcaagaacagcctctgggacgcacagggcttaaagagcttcttccagtccgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actcactggcaagaacagcctctgggacgcacagggcttaaagagcttcttccagtccgc 384
Query: 185 ggcgctgtcacctgggaaggtgatagggtacaggctgtagtcaaatctccggaggaagga 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 ggcgctgtcacctgggaaggtgatagggtacaggctgtagtcaaatctccgcaggaagga 444
Query: 245 ccagctggcaagctaaagtcagaaaaacataattcaatttggatttgttttactttcaac 304
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 ccagctggcaagctaaagtcagaaaaacataagccaatttggatttgttttactttcaac 504
Query: 305 cttctctgtaacatcataaactaataatactaataatagctacaaaacgaaaatgctgaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttctctgtaacatcataaactaataatactaataatagctacaaaacgaaaatgctgaa 564
Query: 365 acttaaaaccacatttatgttataccgttaaaaggttctttttcctcacttcctccattt 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acttaaaaccgcatttatgttataccgttaaaaggttctttttcctcacttcctccattt 624
Query: 425 ttatttcaaatctaagaatcatgacgatacacttaaacctttccatcacggcctccgggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttatttcaaatctaagaatcatgacgatacacttaaacctttccatcacggcctccgggg 684
Query: 485 aagtggattttaaagtcagtgttcagaccactgagattgatcagcccagaacgctaagaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagtggattttaaagtcagtgttcagaccactgagattgatcagcccagaacgctaagaa 744
Query: 545 tgagaatctgagt 557
|||||||||||||
Sbjct: 745 tgagaatctgagt 757
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space: 518009
Effective search space used: 518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_k14.g1 MSMg01no378_k14.g1 CHROMAT_FILE:
MSMg01no378_k14.g1 PHD_FILE: MSMg01no378_k14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:12 2005
(494 letters)
>mm_chr15_93296856_93297747
Length = 892
Score = 862 bits (446), Expect = 0.0
Identities = 482/494 (97%), Gaps = 2/494 (0%)
Strand = Plus / Minus
Query: 1 cagttctgggaatctgatgtactcttttaatgtctggtggcaacaggcatacagatatac 60
|||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||
Sbjct: 783 cagttctgggaatctgatgtcctcttttagtgtctggtggcaccaggcatacagatatac 724
Query: 61 aggaagtcacaaactcatacacataatgtaattactactatttatttaaaaaatgtaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 aggaagtcacaaactcatacacataatgtaattactactatttatttaaaaaatgtaagg 664
Query: 121 caaaattaccaaaacccaatgtagctacgaccttgtttttagaccctcatgactttctat 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cgaaattaccaaaacccaatgtagctacgaccttgtttttagaccctcatgactttctat 604
Query: 181 ccattgatatttaatccttaaagtggaaaaacgttatcttgaaaattatttgctctattt 240
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 603 ccattgatatttaatccttaaattgg-aaaacgttatcttgaaaattatttgctctattt 545
Query: 241 aaaaattatcaatatttctaaccatacatttattatcatgtgctagcttcctgaatttgg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaaaattagcaatatttctaaccatacatttattatcatgtgctagcttcctgaatttgg 485
Query: 301 gggggaaggggaaattctggccttacttcttgctcatgtgaggaaaccgaagtctctaac 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 484 gggggaaggggaaattctggccttacttcttgctcatgtgaggaatccgaagtctctaac 425
Query: 361 agaagagagccccagagatcatctctttctcaaggtagtgcctcatgatatacaccatac 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agaagagcgccccagagatcatctctttctcaaggtagtgcctcatgatatacaccatac 365
Query: 421 gtaacaaataatttttttcttgcctccatttctcataaacaggcacctgccaccttgctc 480
||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 364 gtaacaaataa-ttttttcttgcctccatttttcataaacaggcacctgtcaccttgctc 306
Query: 481 aactgttttataat 494
||||||||||||||
Sbjct: 305 aactgttttataat 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 892
Length adjustment: 10
Effective length of query: 484
Effective length of database: 882
Effective search space: 426888
Effective search space used: 426888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
