Query= MSMg01no378_l18.b1 MSMg01no378_l18.b1 CHROMAT_FILE:
MSMg01no378_l18.b1 PHD_FILE: MSMg01no378_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:17 2005
(462 letters)
>mm_chr15_92547560_92548421
Length = 862
Score = 862 bits (446), Expect = 0.0
Identities = 455/458 (99%)
Strand = Plus / Minus
Query: 5 gaattccaaggcttacttcttcttgattaaatttctgctctaatagtcactgaaaagctc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaattccaaggcttaattcttcttgattaaatttctgctctaatagtcactgaaaagctc 603
Query: 65 agagtatacatgggaacttaaagacaagaagaactcggtggactttggtgagacatttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 agagtatacatgggaacttaaagacaagaagaactcggtggactttggtgagacatttgg 543
Query: 125 tcaagtctgatgacatgagccatgagaggaagggttccagtgagaggcaccgtgtgtggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcaagtctgatgacatgagccatgagaggaagggttccagtgagaggcaccgtgtgtggg 483
Query: 185 ggaacagcccagtgtagcggaagtaaaaggtgcatgggacagactcataaccgaagtcct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggaacagcccagtgtagcggaagtaaaaggtgcatgggacagactcataaccgaagtcct 423
Query: 245 tgtcagaggagggagaaggtgctcaagatacaaaggcacagattttcaccttacataaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtcagaggagggagaaggtgctcaagatacaaaggcacagattttcaccttacataaat 363
Query: 305 tacaaatttatatattagggctattgagagaaagcaaagacttgggttttttagcgttta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 362 tacaaatttatatattagggctattgagagaaagcaaagacttgggttttttagcattta 303
Query: 365 gctcaggcagacccaaaaattccttatattttaaatttagtattggttgagatttttagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gctcaggcagacccaaaaattccttatattttaaatttagtattggttgagatttttagg 243
Query: 425 aaatcaacattattatacattttctgggttcatttaaa 462
|||||||||||||||||||||||||||||| |||||||
Sbjct: 242 aaatcaacattattatacattttctgggtttatttaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_l18.g1 MSMg01no378_l18.g1 CHROMAT_FILE:
MSMg01no378_l18.g1 PHD_FILE: MSMg01no378_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:17 2005
(463 letters)
>mm_chr15_92355802_92356664
Length = 863
Score = 853 bits (441), Expect = 0.0
Identities = 460/471 (97%), Gaps = 8/471 (1%)
Strand = Plus / Plus
Query: 1 caatctctccactgccatcacattatcagcagtaatatatggccgcatctaaatataagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatctctccactgccatcacattatcagcagtaatatatggccgcatctaaatataagg 260
Query: 61 ggtgagaactgatacggctgaggagctctggctaatttgcccgtaaatatatcatgtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgagaactgatacggctgaggagctctggctaatttgcccgtaaatatatcatgtccc 320
Query: 121 ggacaataagcacgtggcacatttaccgtgccattgcatagcctattttttggcgtgaaa 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacaatgagcacgtggcacatttaccgtgccattgcatagcctattttttggcgtgaaa 380
Query: 181 tttaaagttttaccatgtttaatggaatatgcgataatgtttccttttggaagtaacacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaaagttttaccatgtttaatggaatatgcgataatgtttccttttggaagtaacacg 440
Query: 241 cctatttagtaagaatttagcaacagtttagggacaattggcttattgcagagaaggaaa 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 cctatttagtaagaatttagcaacggtttagggacaattggcttattgcagagaaggaaa 500
Query: 301 ggattgacaaaggtagattctaaacctgtaaaagaagtgcagcctctcagagtttaccac 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ggattgacaaaggtagattctaaacctgtaaaagaagcgcagcctctcagagtttaccac 560
Query: 361 catatccctgggtctgttgctattagttttcacgttgcagttattttaatagtgtgtacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catatccctgggtctgttgctattagttttcacgttgcagttattttaatagtgtgtacc 620
Query: 421 ttttttttttttt--------gtaggattagaagtctgaggaatacttaaa 463
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 tttttttttttttttttttttgtaggattagaagtctgaggaatacttaaa 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
