Query= MSMg01no381_l07.b1 MSMg01no381_l07.b1 CHROMAT_FILE:
MSMg01no381_l07.b1 PHD_FILE: MSMg01no381_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:12 2005
(214 letters)
>mm_chr15_28453095_28453708
Length = 614
Score = 398 bits (206), Expect = e-115
Identities = 212/214 (99%)
Strand = Plus / Plus
Query: 1 gaaatgcattttatgtggtatttcagatttcctcttttcctttgactggaaaatgagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaatgcattttatgtggtatttcagatttcctcttttcctttgactggaaaatgagttt 260
Query: 61 acagttgttttaacactatgagatctttaaggacccaattgcattctgtacatctgtcca 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 261 acagttgttttaacactatgagatctttaaggacccaattgtattctgtacatctgttca 320
Query: 121 cttggccacacaaaccagttggttctcattgtgtcttcagaaatgagcactccaagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggccacacaaaccagttggttctcattgtgtcttcagaaatgagcactccaagtttt 380
Query: 181 ggctgtgcttgggctcagagaatgacgcccaaag 214
||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctgtgcttgggctcagagaatgacgcccaaag 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 614
Length adjustment: 9
Effective length of query: 205
Effective length of database: 605
Effective search space: 124025
Effective search space used: 124025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no381_l07.g1 MSMg01no381_l07.g1 CHROMAT_FILE:
MSMg01no381_l07.g1 PHD_FILE: MSMg01no381_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:12 2005
(344 letters)
>mm_chr15_28594112_28594855
Length = 744
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%), Gaps = 2/342 (0%)
Strand = Plus / Minus
Query: 1 tgacgtgcctcttccctcccctgctttcttcatgagcactattacattatttggcagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgacgtgcctcttccctcccctgctttcttcatgagcactattacattatttggcagaca 482
Query: 61 tacacccttgtttcctttagtgatttctaccacagtgtctaggactaactgcatcaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tacacccttgtttcctttagtgatttctaccacagtgtctaggactaactgcatcaaaca 422
Query: 121 tgtgtgtttatgaatgcttacatgggcactctcactaatcactgtcttaaaggcttcaag 180
|||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 421 tgtgtgtttacgaatgcttacatgggcactctcactcatcactgtcttaaatgcttcgag 362
Query: 181 tggatgttctttgtctttcaccccagttaga-ctggaaggctgctattctgctttgatcc 239
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 361 tggatgttctttgtctttcaccccagttagagc-ggaaggctgctattctgctttgatcc 303
Query: 240 cattttgcaggtgcagagcttgagtataaaatgaatcctgaaacccatgaggttggtatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cattttgcaggtgcagagcttgagtataaaatgaatcctgaaacccatgaggttggtatc 243
Query: 300 cacagacgccaggctctcaaacatcacatcttaaaccctatt 341
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cacagacgccaggctctcaaacatcacatcttaaaccctatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
