XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTG
AAAAATCTGAGTGAAATTCTTAAGGTAGAGAGAGAGGGAGAAATTCTGCC
TCTGCAAAGCAAATGAAAGTCTGCAAGTGAGAAATCTGCAGCAGGGTGAA
TCGTTAATCACTCTTCAAGGTCCGATTCTTCTTACTGAATTTCCCTTCTT
TTTTGGCCCAGTGACACATTCACTGAAGGATCATGATTCTATACAATTAA
TTCCATGACTATAAGTAGTGAAAAAAGAGAGGTTATTAAAACTCAGGAGA
CTTCTGAGTTCCAGTAAAACCATTAAGAAGGAACTAATGTGATAATAAAA
TGAAAAGCAATTCAAAACTTATCAGGCTAATAAAGAGTATAACCAAATAT
CTTATAGTAATAAAAATCTTTGGAAGTGAAACAAAGGGAAAAAAAAGACC
CTCCAGCTCAGATTAACAATCTGTTATGATGGGTTTGGCCCTCATTAAGT
CGGCCATGGTACCTTGCAGAGGATATTTAATTATCAGGTGATTTGTAACC
ATTGTCTAGGGAGAGTTATGGGGGGTAAGTGTTTTGATGTCCTCCCCTAC
CCTACCGAACCCCCTGTCTCCTAACTTTTCCGTGGATTCATCCAAAGAAT
TTCTCCCACAATGTGGGGGTGGAGCAACCTAAGCATTGGAAACAACCCTT
CTTGCCCAAAAAATAGGTATTTTCTCTTATATGATGGAATTCAAGTTCTC
AAATGCTTCTTTTTTTAAG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCACCTGAGAATACTGAATGGCTGAGAAGCACC
TGAAAAAATGTTCAGCATTCTTAATCATCAGGGAAATGCAAATCAAAACA
ACCCTGAGATTCCACCTCATACCAGTCAGAATGGCTAAGATCAAAAATTC
AGGTGACAGCAGATTTGGCAAGGATGTGGAGAAAGAGAAACACTCCTCCA
TGGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGC
GGTTCCTCAGAAAACTGGACATAGTACTATTGGAGGATCACGCAATACAA
CTCCTTGGCATATATCCAGAAGATGTTCCAACCAGTAAGAAGGACACATG
CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGGAAG
AACCCAGATGCCCCTCAACAGAGGAATGAATACAGAAAATGTGGTACATT
TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATT
CCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCC
AATCACAAAAGAACTCACACAATATGTACTCACTGATAAGTGGATATTAG
CCCACAAACTTAGAATACGCCAGATATAAGATATAATTACTTAACCCTTG
AAACTCCCGAAGAACGAAGACCAAGTGCGGAAACTTTGTCCCCTTCTATA
ATTGGGAACN

Query= MSMg01no383_b12.b1 MSMg01no383_b12.b1 CHROMAT_FILE:
MSMg01no383_b12.b1 PHD_FILE: MSMg01no383_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:02 2005
         (524 letters)



>mm_chr15_31560420_31561345
          Length = 926

 Score =  978 bits (506), Expect = 0.0
 Identities = 518/522 (99%), Gaps = 2/522 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgaaa-aatctgagtgaaattcttaaggtagagagagagggagaaattctgcct 63
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgaaacaatctgagtgaaattcttaaggtagagagagagggagaaattctgcct 264

                                                                       
Query: 64  ctgcaaagcaaatgaaagtctgcaagtgagaaatctgcagcagggtgaatcgttaatcac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgcaaagcaaatgaaagtctgcaagtgagaaatctgcagcagggtgaatcgttaatcac 324

                                                                       
Query: 124 tcttcaaggtccgattcttcttactgaatttcccttcttttttggcccagtgacacattc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcttcaaggtccgattcttcttactgaatttcccttcttttttggcccagtgacacattc 384

                                                                       
Query: 184 actgaaggatcatgattctatacaattaattccatgactataagtagtgaaaaaagagag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actgaaggatcatgattctatacaattaattccatgactataagtagtgaaaaaagagag 444

                                                                       
Query: 244 gttattaaaactcaggagacttctgagttccagtaaaaccattaagaaggaactaatgtg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttattaaaactcaggagacttctgagttccagtaaaaccattaagaaggaactaatgtg 504

                                                                       
Query: 304 ataataaaatgaaaagcaattcaaaacttatcaggctaataaagagtataaccaaatatc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataataaaatgaaaagcaattcaaaacttatcaggctaataaagagtataaccaaatatc 564

                                                                       
Query: 364 ttatagtaataaaaatctttggaagtgaaacaaagggaaaaaaaa-gaccctccagctca 422
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 565 ttatagtaataaaaatctttggaagtgaaacaaagggaaaaaaaaagaccctccagctca 624

                                                                       
Query: 423 gattaacaatctgttatgatgggtttggccctcattaagtcggccatggtaccttgcaga 482
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 gattaacaatctgttatgatgggtttggccctcattaagtcggccatggtaccttgaaga 684

                                                     
Query: 483 ggatatttaattatcaggtgatttgtaaccattgtctaggga 524
           |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 685 ggatatttaattatcaggtgatttgtaaccatagtctaggga 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 926
Length adjustment: 10
Effective length of query: 514
Effective length of database: 916
Effective search space:   470824
Effective search space used:   470824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)