Query= MSMg01no383_o08.b1 MSMg01no383_o08.b1 CHROMAT_FILE:
MSMg01no383_o08.b1 PHD_FILE: MSMg01no383_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:03 2005
(436 letters)
>mm_chr15_25393064_25393899
Length = 836
Score = 824 bits (426), Expect = 0.0
Identities = 432/434 (99%)
Strand = Plus / Minus
Query: 3 ggaattctatcttgttcgctgcttccatgctccaccctttacccaaacataaatccattt 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggaattctatcttgttggctgcttccatgctccaccctttacccaaacataaatccattt 443
Query: 63 ctgggaactggtgggaataatagtgagtttccttagctgggttggcaagcaaacaaacaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgggaactggtgggaataatagtgagtttccttagctgggttggcaagcaaacaaacaa 383
Query: 123 acagaaagctagcatctgcataagagagatctgcatgaatcctttgaaaatttagtgagg 182
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acggaaagctagcatctgcataagagagatctgcatgaatcctttgaaaatttagtgagg 323
Query: 183 ctgtgactttgtaagggtttgggacacagaaggaagtgacttttaacctgggtctcaaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctgtgactttgtaagggtttgggacacagaaggaagtgacttttaacctgggtctcaaaa 263
Query: 243 gataaaggagaagttaatatgtgtttataatttcaagacagatagtcatattttggagtt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gataaaggagaagttaatatgtgtttataatttcaagacagatagtcatattttggagtt 203
Query: 303 tgttttagtcagggtttgtattcctgcacaaaatatcatgaccaagaagcaagttgggga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgttttagtcagggtttgtattcctgcacaaaatatcatgaccaagaagcaagttgggga 143
Query: 363 ggaaagggtttattcagcttacacttccacattgctgttcatcaccaaaggcagtcagta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ggaaagggtttattcagcttacacttccacattgctgttcatcaccaaaggcagtcagta 83
Query: 423 ctggaactcacaca 436
||||||||||||||
Sbjct: 82 ctggaactcacaca 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_o08.g1 MSMg01no383_o08.g1 CHROMAT_FILE:
MSMg01no383_o08.g1 PHD_FILE: MSMg01no383_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:04 2005
(436 letters)
>mm_chr15_25232520_25233355
Length = 836
Score = 698 bits (361), Expect = 0.0
Identities = 425/463 (91%), Gaps = 29/463 (6%)
Strand = Plus / Plus
Query: 1 tcacgaactgaaaggcaatatggctaaggaccacagctccctgacattgtctcaaagcaa 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tcacgaactgaaaggcaatattgctaaggaccacagctccctgacattgtctcaaagcaa 233
Query: 61 aggctctggcgagcagcctgtgccttggagactagccacactttctcttgctttgagttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aggctctggcgagcagcctgtgccttggagactagccacactttctcttgctttgagttg 293
Query: 121 ccagtctcaaaacctagccaacttgaaga---------------ctgcttccttcggctg 165
||||||||||||||||||||| ||||||| ||||||||||||| ||
Sbjct: 294 ccagtctcaaaacctagccaatttgaagactgcacaacagatccctgcttccttcggttg 353
Query: 166 atctttctaaagcctaatgctagtatgcctcatgcaaccagtctgtatcagatgctggcc 225
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atctttccaaagcctaatgctagtatgcctcatgcaaccagtctgtatcagatgctggcc 413
Query: 226 acacttcgtggcagtgagtgtcaccacactgagtcatacagcagcctgacggaaatgaaa 285
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 acacttcgtggcagtgaatgtcaccacactgagtcatacagcagcctgacggaaatgaaa 473
Query: 286 atgtttctactgtaattgtctcttctt------------tttttttttctttttgtggaa 333
||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 474 atgtttctactgtaattgtctcttcttcttttttttttttttttttttctttttggggaa 533
Query: 334 tttttccagcatggactttgtatgaacttctattttaatactttaaaacactgtttatct 393
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttttttcagcatggactttgtatgaacttctattttaatactttaaaacactgtttatct 593
Query: 394 tgatggctggtttggggggg-gtttcttctttttttcttttta 435
||||||||||||| || ||| ||| ||||||||||||||||||
Sbjct: 594 tgatggctggttttggagggcgtt-cttctttttttcttttta 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
