Query= MSMg01no385_a15.b1 MSMg01no385_a15.b1 CHROMAT_FILE:
MSMg01no385_a15.b1 PHD_FILE: MSMg01no385_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:29 2005
(119 letters)
>mm_chr15_24022713_24023231
Length = 519
Score = 215 bits (111), Expect = 9e-61
Identities = 114/115 (99%)
Strand = Plus / Plus
Query: 5 gaattcaattactttattattgaatgtgacagaaagaagtattccatggcatgtatagca 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcaattactttattattgaatgtgacagaaagaagtattccatggcacgtatagca 264
Query: 65 tcacattttaagagccaatatcagtacatgctcaaaaagcccatggaaataacat 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcacattttaagagccaatatcagtacatgctcaaaaagcccatggaaataacat 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no385_a15.g1 MSMg01no385_a15.g1 CHROMAT_FILE:
MSMg01no385_a15.g1 PHD_FILE: MSMg01no385_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:29 2005
(575 letters)
>mm_chr15_24182543_24183517
Length = 975
Score = 677 bits (350), Expect = 0.0
Identities = 389/418 (93%), Gaps = 26/418 (6%)
Strand = Plus / Minus
Query: 1 catttaatatatggaatgcatttagtggactctgatgtatcacatcgtttctatgtcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 catttaatatatggaatgcatttagtggactctgatgtatcacatcgtttctatgtcttt 353
Query: 61 tgatgcttccattgcagctaagagatacaaatttttaactgagcttgaaaatcattaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tgatgcttccattgcagctaagagatacaaatttttaactgagcttgaaaatcattaggg 293
Query: 121 aaataaactcaaaaggtatttgcctcatagaattgcccttgagctttaatgagtaactct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aaataaactcaaaaggtatttgcctcatagaattgcccttgagctttaatgagtaactct 233
Query: 181 taaatttgtaaagtgtgtttgatgttttgcatatgcttggctcattggaagtgacactat 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 232 taaatttgtaaagtgtgtttgatggtttgcatatgcttggctcattggaagtgacactat 173
Query: 241 taggggtgtg--------------------accttgttggaattggtgtagccttgttag 280
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 172 taggggtgtggccttgttggaataggtgtgaccttgttggaattggtgtagccttgttag 113
Query: 281 gggaagtatgtcactgtatgggtgggttttgagagcctcctggcttgctgtggaaaatag 340
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 112 gggaagtatgtcactgt------gggttttgagagcctcctggcttcctgtggaaaatag 59
Query: 341 agtcttctgcagatcaaagactctcaacatctccagcagcacatcctcctggatgctg 398
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 agtcttctgtagatcaaagactctcaacatctccagcagcacatcctcctggatgctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
