TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGGA
ATTCCACAATATGTCGGAGCTTAAACATAGGAGATATCAAAGCTTACTCC
CACCATGATATAATTCCTCTCACAAGGCCACACCTCCTAATAGTGTCATT
CCCTGCTGATCAAGCATCCAAACACATGAATCTATGGGTGGTAAACCTAT
GTAAACCACCACAATGACCCAAGAAGTTTTTTTTTTCCATTTTTTATTAG
GTATTTAGCTCATTTACTTTTCCAATGCTATACCAAAAGTCCCCCATATC
CANCCACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCGGNGTG
TTCCCCTGTACTGGGGCCGNNNNAGNTTGAAANNNNNAATGCGCGCTAGN
NNNNNNNNNCNNNNCCACCAANNNCCATCTTTTTGATTTATAAGCACCTA
AAGCCCAAGAACTCCGGGGGCCCCCCCCCCCTTTCCAAAATGGTTGTTCC
CCCCCATTAGGTTTTGCAAAACCCCCTTTAACCCCCCTGGGGAAAATTTT
TTCTAAGGTCCCCCCGCTGGGGACTTTNNNTTTTNNNNNNNNNNNNNNNN
NNNNNACCCTTNNNNNTCCCCCCCTTCTCCTTTTTTTTTAAAANCCCCCC
TGTAAACCCTTTTTTCACAACTCCCCCCAAAAATTTTTTTTTCCATAACC
CCCACCAAATATTTTTTTTTCTCTCAAAAAAATTAAAANACACTGCCGGC
CTAAAAATATACAACAACCAATATTTTTTTTTCATTATCTTCTG

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTAGACTAAAGCTTCCTAGTACA
TCCTCATGAAAGTGCTGCAGCTTTACCCCCCCCACACACACACACTCACA
CTACATAAATAAACGTAATGTTTTTTTTAGAAAGTAAAAACTATAAAATG
AGGGAAACCCATCAAAGACATTAGAAATGACAAGCATCACAGGCTTGAAT
TCATTTAATTATACGGATGAAGATTTATAGGACTAGAGAATACTATTGTG
CTTTAAAAAACATAGTAAGGTAAAACTAGACCTCAAATATTCGTTGATCA
TATTTGTTCACTCTTCCATTGTAAATGGAAGAAGCACTTTTGTACTGGAT
GATCTCAAAGAGGACATTTCAAAAATTTCAGCTTTGGTAATCCCCTTGGT
GCTTGGATTCAGAAAACTTTCCATAGTGTAAAATTCTGGTATCTATATCT
TTCTTCTTCCTCTTCTTCACCCTTTCCTCACAATTCTTGGCAGTAGTGAC
ACTTTCAGTTCATTTTGTCAGAAGGCTCCCCACTTTTTGGTAGTAGTAGC
AAACGTGACAGAGTGTATTTGACATCAGAAATAACTTGAACCCTATCTCT
AATTATTATTATATATATCCAGAGAAAGATATTTAATCTCTGCTTTCAGG
ATTTTTATTTCTAAG

Query= MSMg01no386_a18.g1 MSMg01no386_a18.g1 CHROMAT_FILE:
MSMg01no386_a18.g1 PHD_FILE: MSMg01no386_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:47 2005
         (621 letters)



>mm_chr15_56174141_56175162
          Length = 1022

 Score = 1180 bits (610), Expect = 0.0
 Identities = 619/622 (99%), Gaps = 1/622 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctagactaaagcttcctagtacatcctcatgaaagtgctgcagctttaccccccccaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 822 tctagactaaagcttcctagtacatcctcatgaaagtgctgcagctttacccccccccca 763

                                                                       
Query: 61  cacacacactcacactacataaataaacgtaatg-ttttttttagaaagtaaaaactata 119
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 762 cacacacactcacactacataaataaacgtaatgtttttttttagaaagtaaaaactata 703

                                                                       
Query: 120 aaatgagggaaacccatcaaagacattagaaatgacaagcatcacaggcttgaattcatt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaatgagggaaacccatcaaagacattagaaatgacaagcatcacaggcttgaattcatt 643

                                                                       
Query: 180 taattatacggatgaagatttataggactagagaatactattgtgctttaaaaaacatag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 taattatacggatgaagatttataggactagagaatactattgtgctttaaaaaacatag 583

                                                                       
Query: 240 taaggtaaaactagacctcaaatattcgttgatcatatttgttcactcttccattgtaaa 299
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 taagggaaaactagacctcaaatattcgttgatcatatttgttcactcttccattgtaaa 523

                                                                       
Query: 300 tggaagaagcacttttgtactggatgatctcaaagaggacatttcaaaaatttcagcttt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tggaagaagcacttttgtactggatgatctcaaagaggacatttcaaaaatttcagcttt 463

                                                                       
Query: 360 ggtaatccccttggtgcttggattcagaaaactttccatagtgtaaaattctggtatcta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggtaatccccttggtgcttggattcagaaaactttccatagtgtaaaattctggtatcta 403

                                                                       
Query: 420 tatctttcttcttcctcttcttcaccctttcctcacaattcttggcagtagtgacacttt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tatctttcttcttcctcttcttcaccctttcctcacaattcttggcagtagtgacacttt 343

                                                                       
Query: 480 cagttcattttgtcagaaggctccccactttttggtagtagtagcaaacgtgacagagtg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 cagttcattttgtcagaaggctccccactttttggtagtagtagcaaacgtgacagagtg 283

                                                                       
Query: 540 tatttgacatcagaaataacttgaaccctatctctaattattattatatatatccagaga 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tatttgacatcagaaataacttgaaccctatctctaattattattatatatatccagaga 223

                                 
Query: 600 aagatatttaatctctgctttc 621
           ||||||||||||||||||||||
Sbjct: 222 aagatatttaatctctgctttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space:   618332
Effective search space used:   618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)