Query= MSMg01no386_f19.b1 MSMg01no386_f19.b1 CHROMAT_FILE:
MSMg01no386_f19.b1 PHD_FILE: MSMg01no386_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:09 2005
(680 letters)
>mm_chr15_9453436_9454515
Length = 1080
Score = 1239 bits (641), Expect = 0.0
Identities = 671/681 (98%), Gaps = 1/681 (0%)
Strand = Plus / Minus
Query: 1 aaaatttccagtaatctataggaccaagttgattcttgttttcatatggccctggaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aaaatttccagtaatctataggaccaagttgattcttgttttcatatggccctggaggaa 683
Query: 61 atcaaagtgcaaagaaagctttaggtctgaaggttgataaagaactcagggagttgtatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 atcaaagtgcaaagaaagctttaggtctgaaggttgataaagaactcagggagttgtatc 623
Query: 121 ttcttcctcccccaccagccatcgcttgttgccaagggttattatctctggtgacttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttcttcctcccccaccagccatcgcttgttgccaagggttattatctctggtgacttgaa 563
Query: 181 gaaaaaatactctaatatgaaattctggcttgtggctatttccaaattcatatcagatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaaaaaatactctaatatgaaattctggcttgtggctatttccaaattcatatcagatga 503
Query: 241 cctcattttttgttaagtttccatataaggaaagtatgtcgagatctgcagtagtaaaag 300
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 502 cctcattttttggtaagtttccatataaggaaagtatgtcgaggtctgcagtagtaaaag 443
Query: 301 aggacttctgaagttccatgagtgctaaggaaatcctttgccgcctacaacccagataag 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 442 aggacttctgaagttccatgagcgctaaggaaatcctttgccgcctacaacccagataag 383
Query: 361 ctgtagattctcactctcctgaatctctagcagtttcctaaagctatacacaaagttttc 420
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 382 ctgtagattctcactcttctgaatctctagcagtttcctgaagctatacacaaagttttc 323
Query: 421 ctgaagtcactggaggaacaacatcttggagttgaatgtcacagaataccctcagtctgt 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctgaagtcactggaggaacaacgtcttggagttgaatgtcacagaataccctcagtctgt 263
Query: 481 ctttgttattgtatttttgtagcacactttctatggagaacaaggacacaaatatctaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctttgttattgtatttttgtagcacactttctatggagaacaaggacacaaatatctaag 203
Query: 541 atctagagatatgcctgagtcagtaaatgtcttgctatgcaagctggtggacctgagctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atctagagatatgcctgagtcagtaaatgtcttgctatgcaagctggtggacctgagctg 143
Query: 601 agctgagctgcctagaatctatgtaaaaactcagtgttgtgtctgccatccc-cccccga 659
|||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||
Sbjct: 142 agctgagctgcctagaatctatgtaaaagctcagtgttgtgtctgccaccccacccccga 83
Query: 660 gttgtgctgcaggcaggggtt 680
|||||||||||| ||||||||
Sbjct: 82 gttgtgctgcagacaggggtt 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_f19.g1 MSMg01no386_f19.g1 CHROMAT_FILE:
MSMg01no386_f19.g1 PHD_FILE: MSMg01no386_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:10 2005
(564 letters)
>mm_chr15_9295763_9296726
Length = 964
Score = 1046 bits (541), Expect = 0.0
Identities = 556/561 (99%), Gaps = 1/561 (0%)
Strand = Plus / Plus
Query: 1 caagcccttgatcttggtcaaggacgttctaggactgttagaacactggcagaaggcttt 60
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 202 caagcccttgatcttggtcaaggacgttctaggactgttggaacactg-cagaaggcttt 260
Query: 61 agccatgtcagaattcaattttaaaaagcacttataataggaaaatactgaaagagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccatgtcagaattcaattttaaaaagcacttataataggaaaatactgaaagagagca 320
Query: 121 cgtggatccatacactagactaatgcggtaatggaacacgggaatgaaaaattaatgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtggatccatacactagactaatgcggtaatggaacacgggaatgaaaaattaatgtat 380
Query: 181 gggtatagaacgctagactccagggggagagcttccttgaaactcttttgcctcatgagt 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggtagagaacgctagactccagggggagagcttccttgaaactcttttgcctcatgagt 440
Query: 241 gacttttaatcctttcggcttgtccagctgactctaccggagagcgtagcagaataggat 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacttttaagcctttcggcttgtccagctgactctaccggagagcgtagcagaataggat 500
Query: 301 taatataacaccatcttgaacaatatgtgaactataactactttctgggggcagttggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatataacaccatcttgaacaatatgtgaactataactactttctgggggcagttggca 560
Query: 361 ctatttgttagcaccattatcacagagacatgaatatacttcagcgattataaaacacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatttgttagcaccattatcacagagacatgaatatacttcagcgattataaaacacaa 620
Query: 421 atatgaatgtaaacatgtagacacatcttggttgtcagctacaggctgaaaactcagaca 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatgaatgtaaacatgtagacgcatcttggttgtcagctacaggctgaaaactcagaca 680
Query: 481 catacatgaccattgggggtttgaggacataggaaaaaggctcactttccagggaacgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catacatgaccattgggggtttgaggacataggaaaaaggctcactttccagggaacgtg 740
Query: 541 ggtagattttgtgtgaggtat 561
|||||||||||||||||||||
Sbjct: 741 ggtagattttgtgtgaggtat 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
