Query= MSMg01no386_k17.b1 MSMg01no386_k17.b1 CHROMAT_FILE:
MSMg01no386_k17.b1 PHD_FILE: MSMg01no386_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:31 2005
(680 letters)
>mm_chr15_16503712_16504791
Length = 1080
Score = 1270 bits (657), Expect = 0.0
Identities = 672/677 (99%), Gaps = 2/677 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccactcc-tttccctatcctaagaggtttcccacatcacttgtaaagactctg 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccactccattt-cctatcctaagaggtttcccacatcacttgtaaagactctg 263
Query: 64 catagtagcctttcgcattgtctaccatgtcaaataggtgggctaagtgaaaagacagga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 catagtagcctttcgcattgtctaccatgtcaaataggtgggctaagtgaaaagacagga 323
Query: 124 caggacaaaacaaaggaaaaagaaacaaaatgacaattaaaaagaacaacattccctccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caggacaaaacaaaggaaaaagaaacaaaatgacaattaaaaagaacaacattccctccc 383
Query: 184 caccccaaattcttttatactcatgtatgaagtagaaagcagagggcacaggaccccttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caccccaaattcttttatactcatgtatgaagtagaaagcagagggcacaggaccccttt 443
Query: 244 caacaaagggaccttgcacagagcctcacaggtactgctgctttgggattgtgacatgca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caacaaagggaccttgcacagagcctcacaggtactgctgctttgggattgtgacatgca 503
Query: 304 aaaatggggcctggggacattgcatgtctgaagcagtcaactgagagatgcaggactcat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaatggggcctggggacattgcatgtctgaagcagtcaactgagagatgcaggactcat 563
Query: 364 gtacctggaagatcactagtcagaaatggtaggcctagtggagagcacagctgggtgact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtacctggaagatcactagtcagaaatggtaggcctagtggagagcacagctgggtgact 623
Query: 424 gtgctcatcaccaacagggaccactccacgccagatgtggaacttgtcctagagccgtct 483
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 624 gtgctcatcaccaacagggaccacttcacgccagatgtggaacttgtcctagagccgtct 683
Query: 484 cacaaaataggctggctttcccactcatcaaagaatgtagaagtcagacttctgtgccct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cacaaaataggctggctttcccactcatcaaagaatgtagaagtcagacttctgtgccct 743
Query: 544 tggttgtaaaagattccatatggaccctctaacccagacttactggatatgaggacaagg 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 744 tggttgtaaaagattccatatggaccctctaacccagacttactggatatgagggcaagg 803
Query: 604 tagacctgaaaggtaacatgcaggtaccttgcgggggctttggggacggcgcacagtaga 663
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 804 tagacctgaaaggtaacatgcaggtaccttgcgggggcttgggggacggcgcacagtaga 863
Query: 664 tgttggggggtggacct 680
|||||||||||||||||
Sbjct: 864 tgttggggggtggacct 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_k17.g1 MSMg01no386_k17.g1 CHROMAT_FILE:
MSMg01no386_k17.g1 PHD_FILE: MSMg01no386_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:31 2005
(327 letters)
>mm_chr15_16668218_16668943
Length = 726
Score = 600 bits (310), Expect = e-176
Identities = 323/328 (98%), Gaps = 3/328 (0%)
Strand = Plus / Minus
Query: 1 atatttaaaaataagaatcactatccatatggatatattaaatgacattcaactaattat 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 526 atatttaaaaataagaatcactatccatatggatatattaaatgagattcaactaattat 467
Query: 61 tgtaccaattttcaccaccagtaacaatttcccagagtaacctgagctacaaaacctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgtaccaattttcaccaccagtaacaatttcccagagtaacctgagctacaaaacctttc 407
Query: 121 tgcaaagctgaagtgatggagaatgtttataatgcagaagaaacgcacactgaacaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tgcaaagctgaagtgatggagaatgtttataatgcagaagaaacgcacactgaacaaaat 347
Query: 181 ttg-tttgaatgaatttaatgtaatctggaaggcatgtcatgatatattatatttgttct 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttgttttgaatgaatttaatgtaatctggaaggcatgtcatgatatattatatttgttct 287
Query: 240 aaactacatagttaaaatgtaaggtgtttatgtttgtgtgcttttgtgtagagtacacac 299
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 286 aaactacacagttaaaatgtaaggtgtttatgtttgtgtgcttttgtgtagagt--acac 229
Query: 300 acacatatatcacacatagagggtgaac 327
||||||||||||||||||||||||||||
Sbjct: 228 acacatatatcacacatagagggtgaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 726
Length adjustment: 9
Effective length of query: 318
Effective length of database: 717
Effective search space: 228006
Effective search space used: 228006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
