Query= MSMg01no387_a06.b1 MSMg01no387_a06.b1 CHROMAT_FILE:
MSMg01no387_a06.b1 PHD_FILE: MSMg01no387_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:57 2005
(414 letters)
>mm_chr15_12353937_12354750
Length = 814
Score = 659 bits (341), Expect = 0.0
Identities = 392/417 (94%), Gaps = 19/417 (4%)
Strand = Plus / Minus
Query: 1 gaattctcccct---gtttcgccatatctcagatggggacactgacgctcacaggattcg 57
|||||||||||| || ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 786 gaattctcccctgcagt---gccatatctcagatggggacactgatgctcacaggattcg 730
Query: 58 gcatataacactaataaaatgtgcaaccaggatgtgtgtcttatggctgggttctctgcc 117
||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 729 gcatatatcactaataaaatgtgcaaccaggatgtg---c--atggctgggttctctgcc 675
Query: 118 cacctccattcctgcaacacctgaagctaaaactgccttttcttttcttttttttttttt 177
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 674 cacctccattcctgcaacacctgaagctaaaactgcctt---tttt-ttttttttttttt 619
Query: 178 taactaagagagaatttcacagatggtaggatagacgagggtctggaaagttctattaga 237
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 taac----agagaatttcacagatggtaggatagacgagggtctggaaagttctattaga 563
Query: 238 ttccaggagtataatagcattgccttgcacgaattatttacttctcatgattgtacaccc 297
||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 562 ttccaagagtataatagcattgccttgcacgaattataaacttctcatgattgtacaccc 503
Query: 298 tattaactgctagactgaactgacaccttccagaacttcaggctaattttcttctagaac 357
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 tattaactgctagactgaactgacaccttccagaacttcaggctagttttcttctagaac 443
Query: 358 agctacaaagccattttcagagcagggccctttttgttctgcaaatttggaggagtg 414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agctacaaagccattttcagagcagggccctttttgttctgcaaatttggaggagtg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_a06.g1 MSMg01no387_a06.g1 CHROMAT_FILE:
MSMg01no387_a06.g1 PHD_FILE: MSMg01no387_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:57 2005
(374 letters)
>mm_chr15_12161393_12162160
Length = 768
Score = 665 bits (344), Expect = 0.0
Identities = 365/374 (97%), Gaps = 6/374 (1%)
Strand = Plus / Plus
Query: 1 aaaagtgaagaaagcctgagggagatcccgtgggaatgatggttgtctgctgggtgacaa 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaagtgaagaaagccagagggagatcccgtgggaatgatggttgtctgctgggtgacaa 260
Query: 61 gaaaattcctttgtttttgttgtaaagtttgctctccatttcctgcatgtccttctttcc 120
|||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||
Sbjct: 261 gaaaattcctttgtttttgttgtaaagttttctctccacttc-tgcatgtcctt---tcc 316
Query: 121 tatccttacgcaaacaccagcagaatttctctgcttccatggagcagaggctgctctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tatccttacgcaaacaccagcagaatttctctgcttccatggagcagaggctgctctcag 376
Query: 181 ccctagtgtgttttggctgtagagtctgtcttcaggagctgtagtttctcctgtgggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccctagtgtgttttggctgtagagtctgtcttcaggagctgtagtttctcctgtgggtgg 436
Query: 241 gtgcctacaggtggagcacgggagggtctcaatggaaggtggcccattgagaggaaacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtgcctacaggtggagcacgggagggtctcaatggaaggtggcccattgagaggaaacac 496
Query: 301 tttgaacgaggagagtcactccccaccccacctcaccccatggctgccttttccctctca 360
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 t--gaacgaggagagtcactccccaccccacctcaccccatggctgccttttccctctca 554
Query: 361 tcctcaatacctga 374
||||||||||||||
Sbjct: 555 tcctcaatacctga 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 768
Length adjustment: 9
Effective length of query: 365
Effective length of database: 759
Effective search space: 277035
Effective search space used: 277035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
