Query= MSMg01no387_d12.b1 MSMg01no387_d12.b1 CHROMAT_FILE:
MSMg01no387_d12.b1 PHD_FILE: MSMg01no387_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:12 2005
(342 letters)
>mm_chr15_20400967_20401704
Length = 738
Score = 572 bits (296), Expect = e-168
Identities = 327/338 (96%), Gaps = 6/338 (1%)
Strand = Plus / Minus
Query: 5 gaattctttgttctattttgtaacccat-ttttttaaaatgggttattggagtttaactt 63
||||||||||||| |||||||||||||| |||||| |||||||||||| |||||||||||
Sbjct: 692 gaattctttgttcaattttgtaacccatatttttt-aaatgggttattcgagtttaactt 634
Query: 64 tttgagttctttatatgtttttgataatagcccttggttggatatagcattagtggaggt 123
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 633 tttgagttctttatatgtttttgatattagcccttggttggatatagcattagtggaggt 574
Query: 124 cctttctcaatctgtaggctgctattttttcctattcccatttattttttaacattgaaa 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 573 cctttctcaatctgtaggctgctattttttcctattcccattt-ttttttaacattgaaa 515
Query: 184 agtctatcgaatattttaagatctatttggccagtaaaccagatgtttagtgttatgtgt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 -gtctatcgaatattttaagatctatttggccagtaaaccagatgtttagtgttatgtgt 456
Query: 244 gtgtgtgtctctgtctgtgcttacattttgttttctattagtgtgatttttttcaagtat 303
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gtgtct--ctctgtctgtgcttacattttgttttctattagtgtgatttttttcaagtat 398
Query: 304 atacaatctaggtatggaggtttttgtttttatcttca 341
|||||||||||| |||||||||||||||||||||||||
Sbjct: 397 atacaatctaggcatggaggtttttgtttttatcttca 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 738
Length adjustment: 9
Effective length of query: 333
Effective length of database: 729
Effective search space: 242757
Effective search space used: 242757
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_d12.g1 MSMg01no387_d12.g1 CHROMAT_FILE:
MSMg01no387_d12.g1 PHD_FILE: MSMg01no387_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:12 2005
(469 letters)
>mm_chr15_20232219_20233087
Length = 869
Score = 886 bits (458), Expect = 0.0
Identities = 466/469 (99%)
Strand = Plus / Plus
Query: 1 ctcataaagttgatgcttctgacaaagtttcatgtgattgcgggtgggggaagtgtagca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ctcataaagttgatgcttctgacaaagtttcatgtgattgggggtgggggaagtgtagca 260
Query: 61 gtgcacagagtctttgactctcctttcttccaataatactcaattctgtcttcaaattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcacagagtctttgactctcctttcttccaataatactcaattctgtcttcaaattcc 320
Query: 121 tcaaacacatcaagttctgtctgatgatgattagtaatgaaactatttggaaatatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaacacatcaagttctgtctgatgatgattagtaatgaaactatttggaaatatttat 380
Query: 181 ttgactgatatttacaattttgtttgcacaactgctgctgctttgatttcaggtttggtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgactgatatttacaattttgtttgcacaactgctgctgctttgatttcaggtttggta 440
Query: 241 tctgcatgtaggatggatccccatgtggggcagtccccttttattaactaataaatttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgcatgtaggatggatccccatgtggggcagtccccttttattaactaataaatttaa 500
Query: 301 aaagcatgtagaaagaaatcttgaagacacatggcaactctctctttgatttgcttttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagcatgtagaaagaaatcttgaagacacatggcaactctctctttgatttgcttttcc 560
Query: 361 tggtaaagaaaattttgcagactcacaaaattgatacacttaatacagggattagaaggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggtaaagaaaattttgcagactcacaaaattgatacacttaatacagggattagaaggt 620
Query: 421 atagatagatgaacaccattcangctgaacgcttaattgctatctccct 469
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 621 atagatagatgaacaccattcaggctgaacgcttaattgctatctccct 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
