Query= MSMg01no388_n17.b1 MSMg01no388_n17.b1 CHROMAT_FILE:
MSMg01no388_n17.b1 PHD_FILE: MSMg01no388_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:16 2005
(453 letters)
>mm_chr15_69739710_69740562
Length = 853
Score = 549 bits (284), Expect = e-160
Identities = 305/312 (97%)
Strand = Plus / Minus
Query: 142 cctcttggttccctggaatctgggactttctagtggctacccccagttcccttcccccta 201
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 853 cctcttgggtccctggaatctgggactttctagtggctacccccagttccctccccccta 794
Query: 202 ctacacacctacttttcaaacaagagccttgagatttcaatattgtcaaggatgacattg 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ctacacacctacttttcaaacaagagccttgagatttcaatattgtcaaggatgacattg 734
Query: 262 aactcttgagagtacagactgtgcctctcaatttctaagactacagatgtgcacctccac 321
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 733 aactcttgagagtacagactgcacctctcaatttctaagactacagatgtgcacctccac 674
Query: 322 agccacttttctacaaggtgattattatgtcatctctataatcaatgtctaaagagtaga 381
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agccacatttctacgaggtgattattatgtcatctctataatcaatgtctaaagagtaga 614
Query: 382 acaatattgtgggttacttatccttgagaaatcttaggaaaatgaatagatataagggat 441
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 613 acaatattgtgggttacttatacttgagaaatcttaggaaaatgaatagatataagggat 554
Query: 442 atgctctcatgt 453
||||||||||||
Sbjct: 553 atgctctcatgt 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_n17.g1 MSMg01no388_n17.g1 CHROMAT_FILE:
MSMg01no388_n17.g1 PHD_FILE: MSMg01no388_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:16 2005
(302 letters)
>mm_chr15_69617234_69617934
Length = 701
Score = 350 bits (181), Expect = e-101
Identities = 258/285 (90%), Gaps = 4/285 (1%)
Strand = Plus / Plus
Query: 1 ctaccctgagtttccaggacttccagaatatcttagttaaaagctgtgtgtttttttgtt 60
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ctaccctgagttttcaggacttccagaatatcttagttaaaagctgtgtgtttttt-gtt 259
Query: 61 tgattattgtttggcttgtttgcttaatctccatctatctacacttttcaaactcctgtt 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 260 tgattattgtttggcttgtttgcttgatctccatctatctacacttttcaaactcctgtt 319
Query: 121 cttcttcttcctccctcttttctcttctcttctcttctcttctcttctcttctcttctct 180
||||||| ||||||||||||| |||| |||| |||| |||| |||| |||| |||| |
Sbjct: 320 cttcttc---ctccctcttttcttttcttttcttttcttttcttttcttttcttttcttt 376
Query: 181 tctcttctcttctcttctcttctcttctcttctcttctcttctcttctctcctctcctct 240
||| |||| |||| |||| |||| |||||||||||||||||||||||||| |||| ||||
Sbjct: 377 tcttttcttttcttttcttttcttttctcttctcttctcttctcttctcttctcttctct 436
Query: 241 cctcttctctcctctcctctcctctcctctcctctcctctcctct 285
||||| ||||||||||| |||| |||| |||| |||| |||||||
Sbjct: 437 cctctcctctcctctcccctcccctcccctcccctcccctcctct 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 701
Length adjustment: 9
Effective length of query: 293
Effective length of database: 692
Effective search space: 202756
Effective search space used: 202756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
