Query= MSMg01no390_g11.b1 MSMg01no390_g11.b1 CHROMAT_FILE:
MSMg01no390_g11.b1 PHD_FILE: MSMg01no390_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:18 2005
(380 letters)
>mm_chr15_7333960_7334740
Length = 781
Score = 706 bits (365), Expect = 0.0
Identities = 374/377 (99%), Gaps = 1/377 (0%)
Strand = Plus / Plus
Query: 1 atttgcatgctatgtcaatgtcctccaagtctgaggttgtgacaatctgaaaaaaa-taa 59
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 201 atttgcatgctatgtcaatgtcctccaagtctgaggttgtgtcaatctgaaaaaaaataa 260
Query: 60 taccgtctctgctagtatataaaccctataaagcataactaacataattgatgagcacca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taccgtctctgctagtatataaaccctataaagcataactaacataattgatgagcacca 320
Query: 120 tgagcagcaaatgtctaggcattttataggcttacccaaacaaccttattctaggtgcga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagcagcaaatgtctaggcattttataggcttacccaaacaaccttattctaggtgcga 380
Query: 180 tgatgcttaaatttcagatgagaaacgtaaaggatggaacatgaagcagacctctgtaat 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tgatgcttaaatttcagatgagaaacgtaaaggatggaacatgaagcagacctctggaat 440
Query: 240 cagtcaaccgtaaaagctgaagctagaatccaaacgcagatttgtctgattggagtctct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagtcaaccgtaaaagctgaagctagaatccaaacgcagatttgtctgattggagtctct 500
Query: 300 gtgattcccctgtgttccacatacaggtggtaatggaagtttatccattacacaacctaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgattcccctgtgttccacatacaggtggtaatggaagtttatccattacacaacctaa 560
Query: 360 tgcttgcttgctttatt 376
|||||||||||||||||
Sbjct: 561 tgcttgcttgctttatt 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 781
Length adjustment: 9
Effective length of query: 371
Effective length of database: 772
Effective search space: 286412
Effective search space used: 286412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_g11.g1 MSMg01no390_g11.g1 CHROMAT_FILE:
MSMg01no390_g11.g1 PHD_FILE: MSMg01no390_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:18 2005
(482 letters)
>mm_chr15_7479817_7480699
Length = 883
Score = 880 bits (455), Expect = 0.0
Identities = 476/483 (98%), Gaps = 1/483 (0%)
Strand = Plus / Minus
Query: 1 gaaagtcaggtggacaacagcagaagcagaggctgtctattaagaaaaacacttccaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gaaagtcaggtggacaacagcagaagcagaggctgtctattaagaaaaacacttccaagg 624
Query: 61 gttaggctagacaggtggggttaccccaccaggtagtcactaataagggatggaggcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 623 gttaggctagacaggtggggttaccccaccaggtagtcactaataagggatgggggcttt 564
Query: 121 tatattacatttcatgggcgatctgggttatttgtatggggaagccttctcaaatgtgtt 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tatattacatttcatgggtgatctgggttatttgtatggggaagccttctcaaatgtgtt 504
Query: 181 ctgttgcatgcagttctagattcaactctacttacgtctcctcagtaccaaatgctccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctgttgcatgcagttctagattcaactctacttacgtctcctcagtaccaaatgctccac 444
Query: 241 ct-tatatttctttttttcatactataatgtgtcacaggtcaccttgagtgcctttgagc 299
|| | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctaaacaggtctttttttcatactataatgtgtcacaggtcaccttgagtgcctttgagc 384
Query: 300 ttgtgccagtggcttctacaggtggcttgggtgggaatttccaggcttcctctttgccaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttgtgccagtggcttctacaggtggcttgggtgggaatttccaggcttcctctttgccaa 324
Query: 360 caggtttgggcttttatagtttgggtttgttttctgacaatttttcagattttgcgtgta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caggtttgggcttttatagtttgggtttgttttctgacaatttttcagattttgcgtgta 264
Query: 420 gccatccagtcctcactttctgtcctatttattactctactgttacaattgtctcaccag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gccatccagtcctcactttctgtcctatttattactctactgttacaattgtctcaccag 204
Query: 480 tac 482
|||
Sbjct: 203 tac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space: 412056
Effective search space used: 412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
