Query= MSMg01no391_j09.b1 MSMg01no391_j09.b1 CHROMAT_FILE:
MSMg01no391_j09.b1 PHD_FILE: MSMg01no391_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:51 2005
(476 letters)
>mm_chr15_5477881_5478755
Length = 875
Score = 855 bits (442), Expect = 0.0
Identities = 466/474 (98%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 1 atttttatatattacccagcttaaaatggagaaaagaatgcctcaacaaacattgtttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 atttttatatattacccagcttaaaatggagaaaagaatgcctcaacaaacattgtttta 614
Query: 61 taaacaacaggtggatgcaagaatgaaaataaaagcactcatgtttatctgagttatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 taaacaacaggtggatgcaagaatgaaaataaaagcactcatgtttatctgagttatata 554
Query: 121 ccataaatccctcaatgctagactgaggctaaatgtctaattatatagggatgatttaga 180
||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 553 ccataaatccctcaaggctagactaaggctaaatgtccaattatatagggatgatttaga 494
Query: 181 agaacgaataaactgaatgtgtaaatgttattctaaagactcaatctaagtctcaggggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agaacgaataaactgaatgtgtaaatgttattctaaagactcaatctaagtctcaggggt 434
Query: 241 tgacaagaaaacactatctagtagttccatcctagataaccagaaaatgcacaagtgcag 300
||||||||| |||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgacaagaagacacaagc-agtagttccatcctagataaccagaaaatgcacaagtgcag 375
Query: 301 aaaagcaagaacctggctagcaccaatggtaaggaggtgggatgagtgaatgagtggagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aaaagcaagaacctggctagcaccaatggtaaggaggtgggatgagtgaatgagtggagt 315
Query: 361 ctgagtctgatgtacatggatacatccacttacatcagcacaggcaagtctctgctaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctgagtctgatgtacatggatacatccacttacatcagcacaggcaagtctctgctaccc 255
Query: 421 agctgtgagagtaatgcagaaataaggcacatatattttcaccctacttcttac 474
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 254 agctgtgagagtaatgcagaaataaggcacatatattttcaccctatttcttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 875
Length adjustment: 10
Effective length of query: 466
Effective length of database: 865
Effective search space: 403090
Effective search space used: 403090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_j09.g1 MSMg01no391_j09.g1 CHROMAT_FILE:
MSMg01no391_j09.g1 PHD_FILE: MSMg01no391_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:51 2005
(240 letters)
>mm_chr15_5313758_5314397
Length = 640
Score = 433 bits (224), Expect = e-126
Identities = 236/240 (98%)
Strand = Plus / Plus
Query: 1 ttcttggcctcagcacagtaaatacagtactgagctccccgatgctggtgttgtgacaac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ttcttggcctcagcacagtaaatacagtactgagctccccgatgctggtgttgtgacagc 260
Query: 61 agcaagttcttgttctgaatgaaagcagtctcaagtgtgtgagagagcattagaggaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaagttcttgttctgaatgaaagcagtctcaagtgtgtgagagagcattagaggaagg 320
Query: 121 ctattacttggtgactgaaagccagctgctcggccctttagtagagtttatacttttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctattacttggtgactgaaagccagctgctcggccctttagtagagtttatacttttgca 380
Query: 181 gttcccctcccctccacctttggcatgcctacaagccaatgaagtgcttttcctgaaatg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcccctcccctccacctttggcatgcctacaagccaatgaagtgcttttcctgaaatg 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
