Query= MSMg01no391_p23.b1 MSMg01no391_p23.b1 CHROMAT_FILE:
MSMg01no391_p23.b1 PHD_FILE: MSMg01no391_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:23 2005
(447 letters)
>mm_chr15_19949466_19950313
Length = 848
Score = 704 bits (364), Expect = 0.0
Identities = 391/400 (97%), Gaps = 1/400 (0%)
Strand = Plus / Minus
Query: 4 gaattcttacactgtttca-tactatttttctttgactttacaatcccagttttcctaca 62
||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gaattcttacactcttttattactatttttctttgactttacaatcccagttttcctaca 341
Query: 63 aagcttatttaggtagctattgttttacttgcacagataaacatttgtttactgtcacat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aagcttatttaggtagctattgttttacttgcacagataaacatttgtttactgtcacat 281
Query: 123 aaccacaggaagcacagtgtcctatcatttccttcttatgatcactgtagtataagagca 182
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 280 aaccacaggaagcacagtgtcctatcatttccttcttatgatcattgtagtataagagaa 221
Query: 183 ggtaaactataacatgaagccgggcagtggtgtcacacacctttaatcccagcacttggg 242
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggtaaactataacatgaagtcgggcagtggtgtcacacacctttaatcccagcacttggg 161
Query: 243 aggcagaggcaggtggatttctgagttcgaggccagtctgttctacaaagtgagttacag 302
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 160 aggcagaggcaggtggatttctgagttcgaggccagcctggtctacaaagtgagttacag 101
Query: 303 gacagccagggctatacagagaaaccctgtcgcaaaaacaaaacaaaacaaaataacaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gacagccagggctatacagagaaaccctgtcgcaaaaacaaaacaaaacaaaataacaaa 41
Query: 363 aaaacaaaactataacacaagggcttcattcatatactta 402
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 40 aaaacaaaactataacacaagggtttcattcatatactta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 848
Length adjustment: 10
Effective length of query: 437
Effective length of database: 838
Effective search space: 366206
Effective search space used: 366206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_p23.g1 MSMg01no391_p23.g1 CHROMAT_FILE:
MSMg01no391_p23.g1 PHD_FILE: MSMg01no391_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:23 2005
(400 letters)
>mm_chr15_19788661_19789461
Length = 801
Score = 745 bits (385), Expect = 0.0
Identities = 397/401 (99%), Gaps = 1/401 (0%)
Strand = Plus / Plus
Query: 1 gaattcatgaagagattaaaattgaaattgctttgtaggacggtctcatttgctagcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcatgaagagattaaaattgaaattgctttgtaggacggtctcatttgctagcttt 260
Query: 61 atttaggtcaaacatcacaaaaattccctatacttcgtaatgtattatgtagtgttagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttaggtcaaacatcacaaaaattccctatacttcgtaatgtattatgtagtgttagag 320
Query: 121 aactgcataaaaagaaccagcaggaatatcaacggaattgagaaaaaaaaa-tatcagtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 aactgcataaaaagaaccagcaggaatatcaacggaattgagaaaaaaaaaatatcagtt 380
Query: 180 ttgtgcaaggggaagcattcttctacttgggaattacaaagggttatttaattttgattg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtgcaaggggaagcattcttctacttgggaattacaaagggttatttaattttgattg 440
Query: 240 aaattagtgtatgtcatatgaacctgaaagaatattgcatcatcttgaagaaagactttt 299
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaattagtgaaggtcatatgaacctgaaagaatattgcatcatcttgaagaaagactttt 500
Query: 300 aggtatacctgtgaggaaataacttgaataaattaattgtggtgaaaagacccacacagc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 aggtatacctgtgaggaaataacttgaataaattaattgtggtgaaaagacccatacagc 560
Query: 360 atgcctgatattgtatggtaacttgaagcttgtattgtaat 400
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgcctgatattgtatggtaacttgaagcttgtattgtaat 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 801
Length adjustment: 9
Effective length of query: 391
Effective length of database: 792
Effective search space: 309672
Effective search space used: 309672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
