Query= MSMg01no392_b13.b1 MSMg01no392_b13.b1 CHROMAT_FILE:
MSMg01no392_b13.b1 PHD_FILE: MSMg01no392_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:31 2005
(244 letters)
>mm_chr15_100474280_100474923
Length = 644
Score = 460 bits (238), Expect = e-134
Identities = 242/244 (99%), Gaps = 2/244 (0%)
Strand = Plus / Plus
Query: 1 aggaaaacgaggagaccctaaaatactaacttgggggagggtgttgttggtatggagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggaaaacgaggagaccctaaaatactaacttgggggagggtgttgttggtatggagcat 260
Query: 61 ctgactacagtgaagatatttgtaaggcatagagtcccaaacagaaggcaggcatggggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgactacagtgaagatatttgtaaggcatagagtcccaaacagaaggcaggcatggggg 320
Query: 121 tgcatacctgtataacagaggcaggaggggtgggggacgacactgagcctttgaagcttg 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 tgcatacctgtataacagaggcaggagggg--ggggacgacactgagcctttgaagcttg 378
Query: 181 cctgatctacaaagtgaggtccagagttctaggccagccagggctatgaggtgagtgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cctgatctacaaagtgaggtccagagttctaggccagccagggctatgaggtgagtgagt 438
Query: 241 gtct 244
||||
Sbjct: 439 gtct 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no392_b13.g1 MSMg01no392_b13.g1 CHROMAT_FILE:
MSMg01no392_b13.g1 PHD_FILE: MSMg01no392_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:31 2005
(410 letters)
>mm_chr15_100669271_100670080
Length = 810
Score = 777 bits (402), Expect = 0.0
Identities = 408/410 (99%)
Strand = Plus / Minus
Query: 1 aaaggactcccttcaacgatgtgaattttgcacttagttacatcagacatctctaggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaaggactcccttcaacgatgtgaattttgcacttagttacatcagacatctctaggcag 551
Query: 61 gtgcaaattcccttgggagtaaatttttttaaaatatcctttcccccctgggaactcata 120
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 550 gtgcaaattccgttgggagtaaattttttttaaatatcctttcccccctgggaactcata 491
Query: 121 aattagtagaggaggggacgtaggctgtgcctccctgaagcaagggcaggcgccattacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aattagtagaggaggggacgtaggctgtgcctccctgaagcaagggcaggcgccattacc 431
Query: 181 agcagaaagcaaaagaaaggctgtgcccatggccaagccttcttgtagttgcagaggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agcagaaagcaaaagaaaggctgtgcccatggccaagccttcttgtagttgcagaggtgg 371
Query: 241 agtaggcttcctgaagatggtgacttttaaagggggaccctaaaggttcggaggggcttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agtaggcttcctgaagatggtgacttttaaagggggaccctaaaggttcggaggggcttc 311
Query: 301 agagccctccgggttccttctcttctgaccagatgctgttcatgaattactccagcagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agagccctccgggttccttctcttctgaccagatgctgttcatgaattactccagcagag 251
Query: 361 ggcggccgcacagagaccggcttctttagccaagtctcctgtgggtctct 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggcggccgcacagagaccggcttctttagccaagtctcctgtgggtctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
