Query= MSMg01no392_n19.b1 MSMg01no392_n19.b1 CHROMAT_FILE:
MSMg01no392_n19.b1 PHD_FILE: MSMg01no392_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:32 2005
(525 letters)
>mm_chr15_6472441_6473365
Length = 925
Score = 984 bits (509), Expect = 0.0
Identities = 518/521 (99%)
Strand = Plus / Minus
Query: 5 gaattcaacttttctttctgtgaggcagatactttcctcccttctgacagctagaatctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gaattcaacttttctttctgtgaggcagatactttcctcccttctgacagctagaatctg 666
Query: 65 aaaagggaacttccaaagcctcgatctcaaagggcagagtagacatagcagcttcctcac 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 665 aaaagggaacttccaaagcctcgatctcaaagggcagagtagacatagcaacttcctcac 606
Query: 125 cacaaggacggcagtgggcaagtgccaatcccaaaggcagtgagaacatgggcatgagcc 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cacaaggacggcagtgggcatgtgccaatcccaaaggcagtgagaacatgggcatgagcc 546
Query: 185 ccctctcccccagtacagaagatcagcgtgtttgcctggagaccagagagggttgtaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ccctctcccccagtacagaagatcagcgtgtttgcctggagaccagagagggttgtaaaa 486
Query: 245 tccaagacttaccatgtttattggaaagagccgatgcgccttgcactccgtgaccctgca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tccaagacttaccatgtttattggaaagagccgatgcgccttgcactccgtgaccctgca 426
Query: 305 gatgctgtgactccggcagtgaatgtgcaagttagctgtgaagagcagctacttcctttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gatgctgtgactccggcagtgaatgtgcaagttagctgtgaagagcagctacttcctttt 366
Query: 365 ctgagcagtgtggtctaaccagccttcacacattgatatggaagggccctatttgcattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctgagcagtgtggtctaaccagccttcacacattgatatggaagggccctatttgcattt 306
Query: 425 tatctcagcccaggaacattgtatggctggccttgtttctctttgttataattgataaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tatctcagcccaggaacattgtatggctggccttgtttctctttgttataattgataaca 246
Query: 485 caagagaagggatagacgaagttttgagggctgaaagatta 525
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 245 caagagaagggatagacgaagctttgagggctgaaagatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_n19.g1 MSMg01no392_n19.g1 CHROMAT_FILE:
MSMg01no392_n19.g1 PHD_FILE: MSMg01no392_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:32 2005
(247 letters)
>mm_chr15_6319962_6320608
Length = 647
Score = 346 bits (179), Expect = e-100
Identities = 218/249 (87%), Gaps = 29/249 (11%)
Strand = Plus / Plus
Query: 1 tccctagctagaatccagcatgaacatacccatgctctcataacacacacacatgcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctagctagaatccagcatgaacatacccatgctctcataacacacacacatgcatgc 260
Query: 61 aacatttctaatgtacatccacacagtttcttgcttgctaagt--tctctctctctcttt 118
|||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 261 aacatttccaatgtacatccacacagtttcttgcttgctaagtagt-------------- 306
Query: 119 ctctctctctctctctctctctctctctctctctctctctctctctctctctctctctct 178
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 -------------tctctctctctctctctctctctctctctctctctctctctctctct 353
Query: 179 ctctcccactcttccccctcccctccctctccctgcttctcttctcttctctttttccct 238
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 354 ctctcccactcttccccctcccttccctctccctgcttctcttctcttctctttttccct 413
Query: 239 ccctccctc 247
|||||||||
Sbjct: 414 ccctccctc 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 115
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
