Query= MSMg01no393_f15.b1 MSMg01no393_f15.b1 CHROMAT_FILE:
MSMg01no393_f15.b1 PHD_FILE: MSMg01no393_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:15 2005
(569 letters)
>mm_chr15_5490333_5491300
Length = 968
Score = 667 bits (345), Expect = 0.0
Identities = 420/451 (93%), Gaps = 15/451 (3%)
Strand = Plus / Minus
Query: 5 gaattcattattaattataaatatcttggtatcttcagaataagtaattatacctactgt 64
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 gaattcattattaattataaatatcttgatatcttcagaataagtaattatacctactgt 385
Query: 65 aataaaaggaaactaaacaaaacaatttttttaatctgatcaaaaatggtctgcatttaa 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 384 aataaaaggaaactaaacaaaac-atttttttaatctgatcaaaaatggtctgcatttaa 326
Query: 125 aggttgctgccccaatatttaaccatctaaccttaattactgtagtgttccatatggtaa 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 325 aggttgctgccccaatatttaaccatctaaccttaattcctgtagtgttccatatagtaa 266
Query: 185 tggagtatactgaccaccacaagttgtcctctgaaatatggaa----ctctctctctctc 240
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 265 tggagtatactgaccaccacaagttgtcctctaaaatatggaactctctctctctctctc 206
Query: 241 tctctcacacacacacacacacacacacacacacacatacacacacatatacatatacat 300
|||||| | ||||||||||||||||||||||||||| |||||||||||| ||||| ||
Sbjct: 205 tctctctctcacacacacacacacacacacacacac--acacacacatat--atatatat 150
Query: 301 atacatatacatatacatatacatatacatatacatat----acatatacatatacatat 356
||| |||||||||| ||||| ||||| ||||| |||| ||| | ||||||| ||||
Sbjct: 149 atatatatacatat--atatatatatatatatatatatacacacacacacatatatatat 92
Query: 357 gtatacatatgccccagtagtacaggggaatgccagggccaagaagcgaggaggggggcg 416
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 atacacatatgccccagtagtacaggggaatgccagggccaagaagcgaggaggggggcg 32
Query: 417 ggtaataggggactttcaggatagcatttga 447
|||||||||||||||||||||||||||||||
Sbjct: 31 ggtaataggggactttcaggatagcatttga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 968
Length adjustment: 10
Effective length of query: 559
Effective length of database: 958
Effective search space: 535522
Effective search space used: 535522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_f15.g1 MSMg01no393_f15.g1 CHROMAT_FILE:
MSMg01no393_f15.g1 PHD_FILE: MSMg01no393_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:15 2005
(538 letters)
>mm_chr15_5297410_5298347
Length = 938
Score = 1033 bits (534), Expect = 0.0
Identities = 537/538 (99%)
Strand = Plus / Plus
Query: 1 ttgccaggactgattatataaaaggggctttttatattttggtcaaaggaacaagacccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgccaggactgattatataaaaggggctttttatattttggtcaaaggaacaagacccc 260
Query: 61 actcaacaaacacattttcttggctatttcactcaacaaacacattttcatggctattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actcaacaaacacattttcttggctatttcactcaacaaacacattttcatggctattta 320
Query: 121 tcatttttttttatcttgttcctgttgaacttcctggccacagtgactgtatgcttgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatttttttttatcttgttcctgttgaacttcctggccacagtgactgtatgcttgact 380
Query: 181 cttgaactagataacatgatctcagaaatatgctctttgggaactgcagagagtccagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgaactagataacatgatctcagaaatatgctctttgggaactgcagagagtccagac 440
Query: 241 ttgaaggatcagcacagtcccttgcgaacatgttccaagcatccagctgttaccactgca 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaaggatcagcatagtcccttgcgaacatgttccaagcatccagctgttaccactgca 500
Query: 301 atgagctggtgcttccgcactgggaagtacagggttccagtgccagaagcgttggtaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgagctggtgcttccgcactgggaagtacagggttccagtgccagaagcgttggtaaaa 560
Query: 361 tgcttgttcccgaactttagagcagataaagaaaaaacagttttggggaagtgatggtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcttgttcccgaactttagagcagataaagaaaaaacagttttggggaagtgatggtga 620
Query: 421 gcatggggaacatactttcacagtgatgaggccacagcgaatttctaggagacaagctgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcatggggaacatactttcacagtgatgaggccacagcgaatttctaggagacaagctgt 680
Query: 481 cacttaggtatgatcagagctcttttcccaaatacgttctctcatggcaactacttgg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacttaggtatgatcagagctcttttcccaaatacgttctctcatggcaactacttgg 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|