Query= MSMg01no393_k09.b1 MSMg01no393_k09.b1 CHROMAT_FILE:
MSMg01no393_k09.b1 PHD_FILE: MSMg01no393_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:40 2005
(469 letters)
>mm_chr15_102205213_102206081
Length = 869
Score = 839 bits (434), Expect = 0.0
Identities = 458/466 (98%)
Strand = Plus / Minus
Query: 4 gaattcaggtcccctgtcccgatggcaggtatctttacccactgagcactgtgcacagtt 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 gaattcaggtcccctggcacgatggcaggtatctttacccactgagcactgtgcacagtt 810
Query: 64 tcaaatcattataacaaccttgagagatgactgtcttgtttctcctttctacagaagagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tcaaatcattataacaaccttgagagatgactgtcttgtttctcctttctacagaagagg 750
Query: 124 aatcctaggttaaacagtttgcccaagcttgcaccatactaaatggctgacagacacaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aatcctaggttaaacagtttgcccaagcttgcaccatactaaatggctgacagacacaga 690
Query: 184 actgtcgggctctaagaccccctttcatgctcatctttgcagccagagccatctttttaa 243
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 689 actgtcgggctctaagaccccctttcatgctcatctttgcagccagggctatctttttaa 630
Query: 244 tatacaaacatttctatatgttgtcctggggattaaggtcacataccttgcatagctgat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tatacaaacatttctatatgttgtcctggggattaaggtcacataccttgcatagctgat 570
Query: 304 gagacatttcccacccccactttctctctcatgttctggggtggaactccggggatctat 363
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 569 gagacatttcccacccccactttctctctcatgttctggggtggaactcctgggatctat 510
Query: 364 gcttgtgaaacactctaccactatctacagaatccaacccccacatcccctttgtgtgtg 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 509 gcttgtgaaacactctaccactgtctacagaatccaacccccacatcccctttgtgtgtg 450
Query: 424 tggcagagcttcactaaattgcctatgctggccatgggcccttgag 469
||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 449 tggcagagcttcactaaattgcctatgctggccgtgggctcttgag 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_k09.g1 MSMg01no393_k09.g1 CHROMAT_FILE:
MSMg01no393_k09.g1 PHD_FILE: MSMg01no393_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:40 2005
(488 letters)
>mm_chr15_102033091_102033979
Length = 889
Score = 891 bits (461), Expect = 0.0
Identities = 482/489 (98%), Gaps = 1/489 (0%)
Strand = Plus / Plus
Query: 1 acgtttccttctgccaagtgtgcacttagaatagtcctatcttttagcagaactcctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgtttccttctgccaagtgtgcacttagaatagtcctatcttttagcagaactcctctc 260
Query: 61 taatgctacaagtagggcgctagtattcgaggataggctcaaatttccaaagggggcctg 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatgctacaagtggggcgctagtattcgaggataggctcaaatttccaaagggggcctg 320
Query: 121 gcccagaggacaacacgcacttccaaatctccaacaagactagtccactgaaggg-aaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gcccagaggacaacacgcacttccaaatctccaacaagactagtccactgaagggaaaaa 380
Query: 180 aggccttttcttgaaaggaagcctagtttagctaggtcaagactgcggggccggagcacg 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 aggccttttcttgaaaggaagcctagtttggctaggtcaagactgcggggccggagcacg 440
Query: 240 tttgccttgggtattgagggaagtcactgagactcacatgcagattgtggtttagtgtgt 299
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgccttggctattgagggaactcactgagactcacatgcagattgtggtttagtgtgt 500
Query: 300 accgcaggactgcgcaacggctcaactctcctcccagctgacctcagtctgcaggtctgc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accgcaggactgcgcaacggctcaactctcctcccagctgacctcagtctgcaggtctgc 560
Query: 360 accccacagtagcaggcaccggaaaaacagacctcaccaagctttaaaaaaaagatcaga 419
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accccacagcagcaggcaccggaaaaacagacctcaccaagctttaaaaaaaagatcaga 620
Query: 420 ggtacgaactgtcccggcttctacctggggcgtcaggagagagacggagattctgctaga 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 ggtacgaactgtcccggcttctacctggggcgtcaggagagagacggagattctgcaaga 680
Query: 480 atcaaccag 488
|||||||||
Sbjct: 681 atcaaccag 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 889
Length adjustment: 10
Effective length of query: 478
Effective length of database: 879
Effective search space: 420162
Effective search space used: 420162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
