NCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCCATTGGCATTGTCAGTCCTTTTTGACCCCGATAGTCATGG
GAACTACCAGCTTCGGAATTGCCCTTAAAACCAGACTTTCTTTGGAGCTC
AGTTTTCGAACTTCTCTACTATTTATTGTAGAGTTCTGAAAATCATTGAA
GGAAGACTCCAGACTCATAGAACATTTATTCTGCAGAAACAACCAGCATA
TGGGAGTCAATCATTCTCTAAAATGGTGACCTAGACAAAGACACTCAGGC
CTCTTTTACAACAGGACTACTGTTAAGAAGTACATCAGAAGGATCTGGTG
TCAAACTGTAATGAGAACTCTTCCAGTCCTCAAGTGTCATGAGTTAATAT
TTCTGAGACAGTAAGCAGACATCTACAACTTAGAGCACATTCTAAGAGGT
TGTTAAACCATTAATCAAAGGTCATCAAGAGGGAACTAAGGATTAAATAT
AAGTGCAAGGACAGAAGATAAATTATTGACTGTGTTTATCTATACAAAAC
TTTAAGGATAACTTAGTTCTGGTCCTTAACTCTCCATGAGCCTGTANAGC
TATGAACATGTAGAGCTAGTGACAAATGATGAATGTTTAGCCAGATAAAT
ACTCTTTGGTTGTTTGGTTTATTAATGACCTATCTCAAATGTTATATCTG
AAATTTATGCATCATTTTTTTTGCTTATATTCCCCCTTGGACCTGAAA

NNNCCGATGATAGTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATG
GCTGAGAAGCACCTGAAAAAAATGTTCACAATCCTTAATCATCAGGGAAA
TGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCT
AAGATAAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAG
AGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCT
GGAAATCAGTCTGGCAGTTCCTCAGAAAATTGGACATAGCACTACCGGAG
GATCCAGCAATACCCCTCCTGGGCATATATCCAGAAGATGTTCCAACTGG
TAAGAAGGACACATGCCCCTCTGTTTTCATAGCAGCCTTATTTATAATAG
CCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAG
AAAATCCGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAA
TGAAAATCTGTAATTCCTAGGCAAATGGATGGACCTGAGTGAGGTAACCC
AATCACAAAGGAACTCACACAATATGTACTCACTGCTAAGTGGGTATTAA
CCCAGAAACTTAGAATACCCACGATAGAAGATACCATTTGCAAAACACAT
GAAATTGAAGAAAAATGAAGACCCAAGGTGGACCCTTTGCCCCC

Query= MSMg01no395_d15.b1 MSMg01no395_d15.b1 CHROMAT_FILE:
MSMg01no395_d15.b1 PHD_FILE: MSMg01no395_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:00 2005
         (511 letters)



>mm_chr15_3745192_3746102
          Length = 911

 Score =  741 bits (383), Expect = 0.0
 Identities = 426/457 (93%), Gaps = 26/457 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtcagtcctttttgaccccgatagtcatgggaactaccagcttcggaattgcccttaaa 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 431 tgtcagtcctttttgaccccgatagtcatgggaactaccagctttggaattgcccttaaa 372

                                                                       
Query: 61  accagactttctttggagctcagttttcgaacttctctactatttattgtagagttctga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 371 accagactttctttggagctcagttttcgaacttctctactatttattgtagagttccga 312

                                                                       
Query: 121 aaatcattgaaggaagactccagactcatagaacatttattctgcagaaacaaccagcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 311 aaatcattgaaggaagactccagactcatagaacatttattctgcagaaacaagcagcat 252

                                                                       
Query: 181 atgggagtcaatcattctctaaaatggtgacctagacaaagacactcaggcctcttttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atgggagtcaatcattctctaaaatggtgacctagacaaagacactcaggcctcttttac 192

                                                                       
Query: 241 aacaggactactgttaagaagtacatcagaaggatctggtgtcaaactgtaatgagaact 300
           ||||||||||||||||||||||||||||||||||||                        
Sbjct: 191 aacaggactactgttaagaagtacatcagaaggatc------------------------ 156

                                                                       
Query: 301 cttccagtcctcaagtgtcatgagttaatatttctgagacagtaagcagacatctacaac 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 --tccagtcctcaagtgtcatgagttaatatttctgagacagtaagcagacatctacaac 98

                                                                       
Query: 361 ttagagcacattctaagaggttgttaaaccattaatcaaaggtcatcaagagggaactaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  ttagagcacattctaagaggttgttaaaccattaatcaaaggtcatcaagagggaactaa 38

                                                
Query: 421 ggattaaatataagtgcaaggacagaagataaattat 457
           |||||||||||| || |||||||||||||||||||||
Sbjct: 37  ggattaaatataggtacaaggacagaagataaattat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space:   451401
Effective search space used:   451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)