Query= MSMg01no396_d12.b1 MSMg01no396_d12.b1 CHROMAT_FILE:
MSMg01no396_d12.b1 PHD_FILE: MSMg01no396_d12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:18 2005
(413 letters)
>mm_chr15_62813622_62814434
Length = 813
Score = 754 bits (390), Expect = 0.0
Identities = 408/414 (98%), Gaps = 1/414 (0%)
Strand = Plus / Minus
Query: 1 aatataggactctataggaatataggaacatataaacttattcatgaatatatacatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aatataggactctataggaatataggaacatataaacttattcatgaatatatacatata 685
Query: 61 tacaaatataacattcagaagtataaataaat-aaaaatacatgagtaaatgcatatgta 119
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 684 tacaaatataacattcagaagtataaataaataaaaaatacatgagtaaatgcatatgca 625
Query: 120 taaatgtgtatgagtgaacctttgttatgaagattatatttatttccattgataaagaaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taaatgtgtatgagtgaacctttgttatgaagattatatttatttccattgataaagaaa 565
Query: 180 tgtgccatataaattagtggtttatttataactttctgaaaagcattgtctttttgttct 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 564 tgtgccatataaattagtggtttatttataactttctgaaaagcattgtttttttgttct 505
Query: 240 tttaatcagttaaggtggacttgaaaataaaccatctgagtctaagaagttgtcaaacgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttaatcagttaaggtggacttgaaaataaaccatctgagtctaagaagttgtcaaacgt 445
Query: 300 gaatctcacaggcctagatttctgcagagggttcgcaataagacatatatccagatatgc 359
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 gaatctcacaggcctagatttctgcagagggtttgcaataagacatatatccagatatgc 385
Query: 360 acaagtctaattagcgtccataacatgttactcattggcttcatgacttttagc 413
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 384 acaagtctaattagtgtccacaacatgttactcattggcttcatgacttttagc 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_d12.g1 MSMg01no396_d12.g1 CHROMAT_FILE:
MSMg01no396_d12.g1 PHD_FILE: MSMg01no396_d12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:18 2005
(517 letters)
>mm_chr15_62643243_62644160
Length = 918
Score = 963 bits (498), Expect = 0.0
Identities = 513/518 (99%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 1 tgtctgaagaaaaat-aaaaaaatttgagaagtggtagtctggattaacaacatataggg 59
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgtctgaagaaaaataaaaaaaatttgagaagtggtagtctggattaacagcatataggg 260
Query: 60 tttttaaaaatatataattcctctaaagatttttgagtaccaaattattttaaaacataa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttaaaaatatataattcctctaaagatttttgagtaccaaattattttaaaacataa 320
Query: 120 aagttggaacaattgagtaagaaacaaatcctccaggaaagaggagctaaaatgaaaaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagttggaacaattgagtaagaaacaaatcctccaggaaagaggagctaaaatgaaaaat 380
Query: 180 caacttgctattatgtttttaagtgctcgagggaatttaaagttcttcttttttttcatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caacttgctattatgtttttaagtgctcgagggaatttaaagttcttcttttttttcatg 440
Query: 240 actttccttgtctgagactatggcttaattgcggtgctaatcctctcatgttccacccag 299
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 actttccttggctgagactatggcttaattgctgtgctaatcctctcatgttccacccag 500
Query: 300 ctagagcttctttgacacagatggtgactgaggcagggcagaaagccagagaatagtcaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctagagcttctttgacacagatggtgactgaggcagggcagaaagccagagaatagtcaa 560
Query: 360 acagctttctgagctccctctcatagctttgacactttcctaacaagacacatcaccaag 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagctttctgagctccctcacatagctttgacactttcctaacaagacacatcaccaag 620
Query: 420 taatcgagacttattggatatttcttgtgttctaacaacctttattggttacaaagatgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taatcgagacttattggatatttcttgtgttctaacaacctttattggttacaaagatgt 680
Query: 480 gtacaatgtgtctttcctcaagaaatttatagctaggt 517
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtacaatgtgtctttcctcaagaaatttatagctaggt 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space: 460356
Effective search space used: 460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
