Query= MSMg01no398_m24.b1 MSMg01no398_m24.b1 CHROMAT_FILE:
MSMg01no398_m24.b1 PHD_FILE: MSMg01no398_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:39 2005
(254 letters)
>mm_chr15_72952044_72952698
Length = 655
Score = 476 bits (246), Expect = e-139
Identities = 253/256 (98%), Gaps = 2/256 (0%)
Strand = Plus / Plus
Query: 1 gttctaggacagccagggctatctagagaccctatctcgaaccccccccccc--aaaaaa 58
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 200 gttctaggacagccagggctatatagagaccctatctcgaaccccccccccccaaaaaaa 259
Query: 59 aagcatgcttgctgcctttctgtagtgacacagtatggttcttttgtgccatgcaggcca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aagcatgcttgctgcctttctgtagtgacacagtatggttcttttgtgccatgcaggcca 319
Query: 119 actaagcaaaataaagaacaccatcagctgcctgtgggttttccttccctgctgctctgg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 actaagcaaaataaagaacaccatcagctgcctgtgggttttccttccctgctgctctgg 379
Query: 179 tgggtgtagtctcggaaacacagacccagaagaaaagagaacaggtggcagtcaagcaaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgggtgtagtctcggaaacacagacccagaagaaaagagaacaggtggcagtcaagcaaa 439
Query: 239 tccggcgcttggactg 254
||||||||||||||||
Sbjct: 440 tccggcgcttggactg 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 655
Length adjustment: 9
Effective length of query: 245
Effective length of database: 646
Effective search space: 158270
Effective search space used: 158270
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no398_m24.g1 MSMg01no398_m24.g1 CHROMAT_FILE:
MSMg01no398_m24.g1 PHD_FILE: MSMg01no398_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:40 2005
(424 letters)
>mm_chr15_73001554_73002377
Length = 824
Score = 797 bits (412), Expect = 0.0
Identities = 418/420 (99%)
Strand = Plus / Minus
Query: 1 taagcgctggtttggctcatgactgtgacctcatgagtgcaagtgtcttttcttggcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taagcgctggtttggctcatgactgtgacctcatgagtgcaagtgtcttttcttggcctg 561
Query: 61 tattcccataggtctttgctgctgctgccaggctcacgggcacactgtcacactgtcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tattcccataggtctttgctgctgctgccaggctcacgggcacactgtcacactgtcaca 501
Query: 121 ctgtggagggttaaagtgtctggtgcttaccatttcttgcctttctgtgagaatggaggc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgtggagggttaaagtgtctgatgcttaccatttcttgcctttctgtgagaatggaggc 441
Query: 181 tctcgtgggagtgggctgggagcctgcttctgtaggttgctttggaacgtcccctgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctcgtgggagtgggctgggagcctgcttctgtaggttgctttggaacgtcccctgattt 381
Query: 241 tggaccctttaggtggtaggatggtggcccaccagggccatttgcatctagtccagttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggaccctttaggtggtaggatggtggcccaccagggccatttgcatctagtccagttgt 321
Query: 301 gtgttctggcctcggagctccacagcctagagaaggaaggtggtgccagtgttgcctgcc 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgttctggccttggagctccacagcctagagaaggaaggtggtgccagtgttgcctgcc 261
Query: 361 gggggctttggctgttgggatccaggtctagtctcacaagtgctctactaactgagctac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gggggctttggctgttgggatccaggtctagtctcacaagtgctctactaactgagctac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
