Query= MSMg01no400_b22.b1 MSMg01no400_b22.b1 CHROMAT_FILE:
MSMg01no400_b22.b1 PHD_FILE: MSMg01no400_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:19 2005
(482 letters)
>mm_chr15_87852663_87853544
Length = 882
Score = 808 bits (418), Expect = 0.0
Identities = 431/440 (97%), Gaps = 9/440 (2%)
Strand = Plus / Minus
Query: 51 cagtagcaagtgtcagcagggacacagagatgcaggcacactgacagtgctaggggaata 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 cagtagcaagtgtcagcagggacacagagatgcaggcacactgacagtgctaggggaata 823
Query: 111 tggacctacaaccactgttgtacgca--------gcacggaaaaccctcacgcaccttag 162
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 822 tggacctacaaccactgttgta-gcactgtcagtgcacggaaaaccctcacgcaccttag 764
Query: 163 cataaagctggcacagaataatttcactcccacctggaaaaacaacacaaacaacaacaa 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 cataaagctggcacagaataatttcactcccacctggaaaaacaacacaaacaacaacaa 704
Query: 223 tgatgacagagacaacaacaaagagacaaggaaaatattctgagccacgccctcctgatg 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgatgacagagacaacaacaaagagacaaggaaaatattctgagccacgccctcctgatg 644
Query: 283 gtcactcaatggtagaaatgtcccaggtgtctgtggatagacggcaccacaagccaccac 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gtcactcaatggtagaaatgtcccaggtgtctgtggatagacggcaccacaagccaccac 584
Query: 343 atccactacatggtgaaatactgttgggagatgaagtgaattcacaaaagaggctatggt 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 atccactacatggtgaaatactgttgggagatgaagtgaattcacaaaagaggctatggt 524
Query: 403 atggatgaacttgaaactgtcattcatattccattagatggtgtggcagccaatagcatt 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atggatgaacttgaaactgtcattcatattccattagatggtgtggcagccaatagcatt 464
Query: 463 ctagaaccacttgtccatgg 482
||||||||||||||||||||
Sbjct: 463 ctagaaccacttgtccatgg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_b22.g1 MSMg01no400_b22.g1 CHROMAT_FILE:
MSMg01no400_b22.g1 PHD_FILE: MSMg01no400_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:19 2005
(426 letters)
>mm_chr15_87675296_87676121
Length = 826
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Plus
Query: 1 tcaagtcagtctcccaccccatgcacagagagcccagcccaggaatcctggttcttttac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaagtcagtctcccaccccatgcacagagagcccagcccaggaatcctggttcttttac 260
Query: 61 tcaggttccctgtgctctggaagtattagccttcatggcaccagggatgctctgacctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaggttccctgtgctctggaagtattagccttcatggcaccagggatgctctgacctga 320
Query: 121 aatgggcagcttctagttagtttctggaactgagtctgctgctcttcaagggctgggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgggcagcttctagttagtttctggaactgagtctgctgctcttcaagggctgggatg 380
Query: 181 tgtatgactctcatagctgtgttttgtctgcttcataggcagtgtttgggggacccactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatgactctcatagctgtgttttgtctgcttcataggcagtgtttgggggacccactt 440
Query: 241 ttatacatatagaaatgtgggctcccattgaacctggtcccctgctccaaacccaggggt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatacatagagaaatgtgggctcccattgaacctggtcccctgctccaaacccaggggt 500
Query: 301 cagcttttgggttagcagccaccaagtccagtggacaacggggtcacatggctactgatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagcttttgggttagcagccaccaagtccagtggacaacggggtcacatggctactgatt 560
Query: 361 ggtacatgaagctgcttcatggctgctatggacagggcagcagagcagaatgcccatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtacatgaagctgcttcatggctgctatggacagggcagcagagcagaatgcccatcat 620
Query: 421 ctctgt 426
||||||
Sbjct: 621 ctctgt 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
