Query= MSMg01no400_f01.b1 MSMg01no400_f01.b1 CHROMAT_FILE:
MSMg01no400_f01.b1 PHD_FILE: MSMg01no400_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:35 2005
(631 letters)
>mm_chr15_13177706_13178737
Length = 1032
Score = 1129 bits (584), Expect = 0.0
Identities = 617/628 (98%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 5 gaattcaactctgttacctgctgttgaaacactcaagaggcacagactgaatagttgtga 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaactctgtaacctgctgttgaaacactcaagaggcacagactgaatagttgtga 264
Query: 65 aaaacaaaatgcagtaatattgatcctgtctaaggtctaagtgtattcccagtagcttgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaacaaaatgcagtaatattgatcctgtctaaggtctaagtgtattcccagtagcttgt 324
Query: 125 tgggcaaagagtgcatggatgtttcttatgggtatatcaagtatgtgagaaaaggccatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgggcaaagagtgcatggatgtttcttatgggtatatcaagtatgtgagaaaaggccatt 384
Query: 185 gggggtcggggtaggcatcgttattgatttgacttaacaagttcatcactaaaagactga 244
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggggtcggggtgggcatcattattgatttgacttaacaagttcatcactaaaagactga 444
Query: 245 aaggatttgggacagaagctgaggctggctttaggaggcactgaagaacttttagaatac 304
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 aaggatttgggacagaagctgaggctggctttaggaggcaccgaagaacttttagaatac 504
Query: 305 agcacatttatttatccagagtggggggaaagaaaggaaa-tctacaagactactgttgt 363
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 505 agcacatttatttatccagagtggggggaaagaaaggaaaatctacaagactactgttgt 564
Query: 364 gggtcatgaaggattcatgaagaaagcactgtatcaaacgttagcatccaccaagctaaa 423
|| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 565 ggatcatgaaggattcatgaagaaagcactatatcaaatgttagcatccaccaagctaaa 624
Query: 424 aaacacacagctggcttacaaagcaccaatactgcagctgctttctacactcctgtttct 483
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaacacacagccagcttacaaagcaccaatactgcagctgctttctacactcctgtttct 684
Query: 484 cctaagttcctgcggctgtggtcctcttcctgctaactacagatgtggtaaaaatgagcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctaagttcctgcggctgtggtcctcttcctgctaactacagatgtggtaaaaatgagcc 744
Query: 544 actagtcatgggagaggattggaactcactgtgattttgaacattcttgaatcatgcaga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 actagtcatgggagaggattggaactcactgtgattttgaacattcttgaatcatgcaga 804
Query: 604 gggtttagaagggctgcttctatgaata 631
|||||||||||||| |||||||||||||
Sbjct: 805 gggtttagaagggccgcttctatgaata 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1032
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1022
Effective search space: 634662
Effective search space used: 634662
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_f01.g1 MSMg01no400_f01.g1 CHROMAT_FILE:
MSMg01no400_f01.g1 PHD_FILE: MSMg01no400_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:35 2005
(522 letters)
>mm_chr15_13336539_13337459
Length = 921
Score = 870 bits (450), Expect = 0.0
Identities = 478/494 (96%), Gaps = 13/494 (2%)
Strand = Plus / Minus
Query: 1 acatggttttacacaatgaatacaaacatcatgcctggttctaagtccccatgaagtccc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 481 acatggttttacacaatgaatacaaacatcatgccttgttctaagtccccatgaagtccc 422
Query: 61 aatatttatctcatttgtatacatgttatgtattaagaaaataaattttggattcaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatatttatctcatttgtatacatgttatgtattaagaaaataaattttggattcaaatg 362
Query: 121 tatctttataaattagtaaatttacttagattactttacaaatggtctacctaatccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatctttataaattagtaaatttacttagattactttacaaatggtctacctaatccatt 302
Query: 181 tctttatttgaatttagaaagaaactaaatgaggatactaagaaaaacaaaacaaaagta 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccttatttgaatttagaaagaaactaaatgaggatactaagaaaaacaaaacaaaagta 242
Query: 241 catatatataccatgtacacaaagcactggggatatctatagaaatatataaaataaatt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catatatataccat-tacacaaagcactggggatatctatagaaatatataaaataaatt 183
Query: 301 attccagtttgatagaagtacaagccatatatatatatatatatatatatatatataaca 360
||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 182 attccagtttgatagaagtacaagccatatatatatatatata-----------a-aaca 135
Query: 361 aactctatatgcttcatatctgttatatacctgttacaagtataactaaatatatatttg 420
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 aactctatatgtttcatatctgttatatacctgttacaagtataactaaatatatatttg 75
Query: 421 tatataattatatgtaaacatatacaattcaaaaatctggttgtgatattgtatgcctat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tatataattatatgtaaacatatacaattcaaaaatctggttgtgatattgtatgcctat 15
Query: 481 aatcccagcactta 494
||||||||||||||
Sbjct: 14 aatcccagcactta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 921
Length adjustment: 10
Effective length of query: 512
Effective length of database: 911
Effective search space: 466432
Effective search space used: 466432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
