Query= MSMg01no400_m19.b1 MSMg01no400_m19.b1 CHROMAT_FILE:
MSMg01no400_m19.b1 PHD_FILE: MSMg01no400_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:13 2005
(469 letters)
>mm_chr15_56760641_56761509
Length = 869
Score = 901 bits (466), Expect = 0.0
Identities = 468/469 (99%)
Strand = Plus / Minus
Query: 1 aaaaaagtttggatcagatgtaatttttggttttctcagtgttctcagagaagccaacgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aaaaaagtttggatcagatgtaatttttggttttctcagtgttctcagagaagccaacgt 610
Query: 61 gcaacaaaacagagagaggatgaagagagtggggtgaacaattgagaaataggctgttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcaacaaaacagagagaggatgaagagagtggggtgaacaattgagaaataggctgttaa 550
Query: 121 cacgcattctggttcagaagctgaagtcaaagtatttatggaatttagtcacaaaaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cacgcattctggttcagaagctgaagtcaaagtatttatggaatttagtcacaaaaacaa 490
Query: 181 caaatgggaatctttagtgggagaaagttgactgttagtaaacccatgctcttcctgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 caaatgggaatctttagtgggagaaagttgactgttagtaaacccatgctcttcctgcat 430
Query: 241 ggaatgttctcatgatgatgtttgaaagcccccatagaatgtctatctggaataaggagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggaatgttctcatgatgatgtttgaaagcccccatagaatgtctatctggaataaggagg 370
Query: 301 ccttcatctttatcacataggtcagaaagaaagagaagtgcatcccatcctaccttactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ccttcatctttatcacataggtcagaaagaaagagaagtgcatcccatcctaccttactc 310
Query: 361 actgtcttgtcatttggacagtaagggtaataaaattctatttttatgacaaaccccaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 actgtcttgtcatttggacagtaagggtaataaaattctatttttatgacaaaccccaat 250
Query: 421 tttaaaactctgcatttagntttattttatgtgcatgggtgtttgcatg 469
||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 249 tttaaaactctgcatttagttttattttatgtgcatgggtgtttgcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_m19.g1 MSMg01no400_m19.g1 CHROMAT_FILE:
MSMg01no400_m19.g1 PHD_FILE: MSMg01no400_m19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:13 2005
(429 letters)
>mm_chr15_56555058_56555885
Length = 828
Score = 783 bits (405), Expect = 0.0
Identities = 423/429 (98%), Gaps = 1/429 (0%)
Strand = Plus / Plus
Query: 1 aggattgaaacagggtagaaaggtctaaggatcatggcccatcagatccccagtagtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggattgaaacagggtagaaaggtctaaggatcatggcccatcagatccccagtagtgtg 260
Query: 61 agtccattgcccaggcccataagcttgtttgcacagtcaggaatagtagtgtttttactc 120
||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||
Sbjct: 261 agtccattgcccaggcccagaagcttgtttgcacagtcaggaatagtagtattttcactc 320
Query: 121 actgcatttgtaaaacgtgactcggctcgactttcaacacttttattgccaatcgcttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 actgcatttgtaaaacgtgactcggctcgactttcaacacttttattgccaatcg-ttta 379
Query: 181 ttacctgttcatctgagacctttgctgagacagaacttgagacaaatgagacagagcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttacctgttcatctgagacctttgctgagacagaacttgagacaaatgagacagagcttg 439
Query: 241 tattcaaggaaatcttataaaggccattatctccaggacaaaatctgaacctacacgagg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tattcaaggaaatcatataaaggccattatctccaggacaaaatctgaacctacacgagg 499
Query: 301 tagttgtcagtctgacatgtgcctacccattctttcactattatattgttctggccttag 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 500 tagttgtcagtctgacatgtgcctacccattctttcactattatattggtctggccttag 559
Query: 361 tctcatcctgtgactattttataatactaatttaccaccttgagttttatcaattcattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctcatcctgtgactattttataatactaatttaccaccttgagttttatcaattcattg 619
Query: 421 atccatcgt 429
|||||||||
Sbjct: 620 atccatcgt 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 828
Length adjustment: 9
Effective length of query: 420
Effective length of database: 819
Effective search space: 343980
Effective search space used: 343980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
