Query= MSMg01no401_b14.b1 MSMg01no401_b14.b1 CHROMAT_FILE:
MSMg01no401_b14.b1 PHD_FILE: MSMg01no401_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:38 2005
(590 letters)
>mm_chr15_6862103_6863093
Length = 991
Score = 1081 bits (559), Expect = 0.0
Identities = 580/587 (98%), Gaps = 1/587 (0%)
Strand = Plus / Minus
Query: 5 gaattctaggaatgccatctcagcatgactcactctctcgctgtttaaaataggatttag 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gaattctaggaacgccatctcagcatgactcactctctcgctgtttaaaataggatttag 732
Query: 65 tagattttcgtgagttagatggg-ttttttccccctagatgcttactgtataaatttacg 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 731 tagattttcgtgagttagatgggtttttttccccctagatgcttactgtataaatttacg 672
Query: 124 atctctaacattctgggaaagaaacatatcactgctagttttagtgcagctttagcatat 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 671 atctctaacattctgggaaagaaacacatcactgctagttttagtgcagctttagcatat 612
Query: 184 tgctacaacttttaacgaggagacttagggaacatggggcacttgtaggctctccccctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgctacaacttttaacgaggagacttagggaacatggggcacttgtaggctctccccctg 552
Query: 244 tctttcctaggaacagagcagatctcctctattactatagtttcaggagaaaggtaaacc 303
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 551 tctttcctaggaacagagcagatctcctctatgactatagtttcaggagtaaggtaaacc 492
Query: 304 tctcccttagttgcaattactaccactctgcctgctaggagactatcaatctaccaggct 363
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 491 tctcccttaattgcaattactaccgctctgcctgctaggagactatcaatctaccaggct 432
Query: 364 ttacaatccgaacaatcacacactgtattaaatataccatgtaaatttatgtggactcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttacaatccgaacaatcacacactgtattaaatataccatgtaaatttatgtggactcaa 372
Query: 424 ctctaaattaatttgggctgaaataaatcaaactgcagccagaccataatttaattaaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ctctaaattaatttgggctgaaataaatcaaactgcagccagaccataatttaattaaaa 312
Query: 484 aattgaaaatatgactcatggcacttaaggttactgatgtttactgccaaaagaagttat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aattgaaaatatgactcatggcacttaaggttactgatgtttactgccaaaagaagttat 252
Query: 544 cgttgctgtggcagagataaatgtaggaagggctgcaggtccctgag 590
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cgttgctgtggcagagataaatgtaggaagggctgcaggtccctgag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 991
Length adjustment: 10
Effective length of query: 580
Effective length of database: 981
Effective search space: 568980
Effective search space used: 568980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_b14.g1 MSMg01no401_b14.g1 CHROMAT_FILE:
MSMg01no401_b14.g1 PHD_FILE: MSMg01no401_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:38 2005
(505 letters)
>mm_chr15_6667711_6668615
Length = 905
Score = 922 bits (477), Expect = 0.0
Identities = 498/509 (97%), Gaps = 8/509 (1%)
Strand = Plus / Plus
Query: 1 ctgtgtacagttttagttactgctgacgaattaaatttaagctcatgttagctttgaaat 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ctgtgtacagttttagttactgctgacgaattaaatttaagcttatgttagctttgaaat 260
Query: 61 ggaggttactgtatatacttcctccccctttgtccttttcctttatttaataggagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaggttactgtatatacttcctccccctttgtccttttcctttatttaataggagaatt 320
Query: 121 tagagttagctgttaattaggttccagccttgttctttccctgacaaaaggagaaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagttagctgttaattaggttccagccttgttctttccctgacaaaaggagaaaaatt 380
Query: 181 acttgaaaaaaggaaaagcgtttggatttttagaagaaaacaaaaagatgttaagagcct 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttgaaaaaaggaaaagcttttggatttttagaagaaaacaaaaagatgttaagagcct 440
Query: 241 gggttttttt----cagttgattctgttattgtttcttttcctactttcattttttaata 296
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggttt----aaaacagttgattctgttattgtttcttttcctactttcattttttaata 496
Query: 297 attctgttttcgtattagaaaatgccacacagaaaaggtataattgccttttattatttt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 attctgttttcgtattagaaaatgccacacagaaaaggtataattgccttttattatttt 556
Query: 357 gagataggagctaaccacaaacttagacttccaaacccagctttctattgtaaacaatac 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gagataggagctaaccacaaacttagacttccaaacccagctttctattgtaaacaatac 616
Query: 417 atatattgccatgaaatgtgtatttggggtattggcatatgcctgggttgggggaaggta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atatattgccatgaaatgtgtatttggggtattggcatatgcctgggttgggggaaggta 676
Query: 477 tgttttatgtatggacttaatgtttattt 505
||||||||||||| |||||||||||||||
Sbjct: 677 tgttttatgtatgaacttaatgtttattt 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
