Query= MSMg01no401_d10.b1 MSMg01no401_d10.b1 CHROMAT_FILE:
MSMg01no401_d10.b1 PHD_FILE: MSMg01no401_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:47 2005
(246 letters)
>mm_chr15_59953496_59954141
Length = 646
Score = 414 bits (214), Expect = e-120
Identities = 244/266 (91%), Gaps = 20/266 (7%)
Strand = Plus / Minus
Query: 1 ctagtgtgaagaaaatttgagtagggagtataaagattgtgctatagacatggaactaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctagtgtgaagaaaatttgagtagggagtataaagattgtgctatagacatggaactaat 283
Query: 61 agcgaaattgtggagcacagtgggaagtcttagcattgactctggcatatgtaaagtgtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 282 agcgaaattgtggagcacagtgggaagtcttagcattgactctggcatatataaagtgtg 223
Query: 121 tcataaaaatgtctaatca------tgtttatatataaatgtgtgtgtgtgtgtgtgtgt 174
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 222 tcataaaaatgtctaatcatgtgtgtgtttatatataaatgtgtgtgtgtgtgtgtgtgt 163
Query: 175 gtgtgtgtgtg--------------cataaataggagaaggatgtgaatttgagaggaag 220
||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 162 gtgtgtgtgtgtgtgtgtgtgtggacataaataggagaaggatgtgaattttagaggaag 103
Query: 221 ctaaagggaaaacctgggggaagttg 246
||||||||||||||||||||||||||
Sbjct: 102 ctaaagggaaaacctgggggaagttg 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 13
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no401_d10.g1 MSMg01no401_d10.g1 CHROMAT_FILE:
MSMg01no401_d10.g1 PHD_FILE: MSMg01no401_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:47 2005
(295 letters)
>mm_chr15_59773650_59774344
Length = 695
Score = 555 bits (287), Expect = e-162
Identities = 293/295 (99%)
Strand = Plus / Plus
Query: 1 ataagcacttcatcaccttagctgtaataattgctaacatatatattgcttcttaagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagcacttcatcaccttagctgtaataattgctaacatatatattgcttcttaagtga 260
Query: 61 tttagagcattctagagccctctgtgtacatattatagttcacaaagtattctggttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttagagcattctagagccctctgtgtacatattatagttcacaaagtattctggttaat 320
Query: 121 ttttatttgttaattgaagcaaactggggtcacctgggaagaaagaacctcagaagtacc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 321 ttttatttgttaattgaagcaaactggggtcacctgggaagagagaacctcagaagtgcc 380
Query: 181 cactatgggcagtaccactcatgggcaggtggtcctggattgtataggaaaggtaactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactatgggcagtaccactcatgggcaggtggtcctggattgtataggaaaggtaactga 440
Query: 241 aaaatccacaagggtgtaagcgaacaacagtgttctttcagcatctctgctttgg 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatccacaagggtgtaagcgaacaacagtgttctttcagcatctctgctttgg 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
