Query= MSMg01no402_a02.b1 MSMg01no402_a02.b1 CHROMAT_FILE:
MSMg01no402_a02.b1 PHD_FILE: MSMg01no402_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:46 2005
(481 letters)
>mm_chr15_31698769_31699649
Length = 881
Score = 891 bits (461), Expect = 0.0
Identities = 473/477 (99%)
Strand = Plus / Minus
Query: 5 gaattcccaagctatataactgagccaggtgtgagtcaacccactgaacgctcagaaaca 64
|||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 gaattcccaagctagagaactgagccaggtgtgagtcaacccactgagcgctcagaaaca 622
Query: 65 tgcattacgattcacatcacagggatgtgctttgcaaagttagctcaacaacaaatttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcattacgattcacatcacagggatgtgctttgcaaagttagctcaacaacaaatttcc 562
Query: 125 taacactcacatgaataaatgaatgtacacattggaacagattcaggatgcttgctgtag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taacactcacatgaataaatgaatgtacacattggaacagattcaggatgcttgctgtag 502
Query: 185 aagtctgctaaaagaggctttaacttgagacacaaaaacgccaattaccttgcaacttgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtctgctaaaagaggctttaacttgagacacaaaaacgccaattaccttgcaacttgg 442
Query: 245 gcttaagaaattgggcattattgtgaaagcctgtgtcataagagcaaacaaaagacaagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcttaagaaattgggcattattgtgaaagcctgtgtcataagagcaaacaaaagacaagc 382
Query: 305 agagcacttcagggtctcagccctagccttcaatcagcccactgccaggagattttacaa 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagcacttcagggtctcagccccagccttcaatcagcccactgccaggagattttacaa 322
Query: 365 ggttagttggcaacatgaacaagatggctctaatgcaagctgctctctcggaattaatac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttagttggcaacatgaacaagatggctctaatgcaagctgctctctcggaattaatac 262
Query: 425 atttggaagtcgagagccaggcaagtggcaatgctaatcaagcaagtgacagcatta 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttggaagtcgagagccaggcaagtggcaatgctaatcaagcaagtgacagcatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_a02.g1 MSMg01no402_a02.g1 CHROMAT_FILE:
MSMg01no402_a02.g1 PHD_FILE: MSMg01no402_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:46 2005
(262 letters)
>mm_chr15_31590805_31591464
Length = 660
Score = 466 bits (241), Expect = e-136
Identities = 257/263 (97%), Gaps = 4/263 (1%)
Strand = Plus / Plus
Query: 1 tgcgtacctgctctgctaagtagaaaattgcatatcaaataatggttcctcagttctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcgtacctgctctgctaagtagaaaattgcatatcaaataatggttcctcagttctgct 260
Query: 61 ctgtctgacacagaacttcctgtttgcagtgttctctgtcactcaggtacatgagccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 --gtctgacacagaacttcctgtttgcagtgttctctgtcactcaggtacatgagccctt 318
Query: 121 ttgccatcctcatctctcgatcttgggcattttctttttttttttttctttctttttttt 180
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 319 ttgccatcctcatctctcgatcttgggcattttcttttttcttttt-ctttctttttttt 377
Query: 181 ttt-gttttttgttttttgagacagggtttttctgtgtagccctggctgtcctggaactc 239
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttttgttttttgttttttgagacagggtttttctgtgtagccctggctgtcctggaactc 437
Query: 240 actttgtataccaggctggcctc 262
|||||||| ||||||||||||||
Sbjct: 438 actttgtagaccaggctggcctc 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 660
Length adjustment: 9
Effective length of query: 253
Effective length of database: 651
Effective search space: 164703
Effective search space used: 164703
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
