Query= MSMg01no402_k11.b1 MSMg01no402_k11.b1 CHROMAT_FILE:
MSMg01no402_k11.b1 PHD_FILE: MSMg01no402_k11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:38 2005
(239 letters)
>mm_chr15_62727114_62727752
Length = 639
Score = 455 bits (235), Expect = e-132
Identities = 238/239 (99%)
Strand = Plus / Plus
Query: 1 tagagatgaggctagatggactcagaccatgtttgtttcctgtaagtgaggcactacaga 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagagatgaggctagatcgactcagaccatgtttgtttcctgtaagtgaggcactacaga 260
Query: 61 ggatttcgtctttactgtggtgttatgtacaaacacctccctcagaatgagttcagtaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatttcgtctttactgtggtgttatgtacaaacacctccctcagaatgagttcagtaca 320
Query: 121 tgttttggttctaacatccaaacatttccatatggtcatctggcttggattaccaagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttttggttctaacatccaaacatttccatatggtcatctggcttggattaccaagtgt 380
Query: 181 tgactcttctatcccttcttgcctgtgttagttctcagggtatggggatggggacagca 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactcttctatcccttcttgcctgtgttagttctcagggtatggggatggggacagca 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no402_k11.g1 MSMg01no402_k11.g1 CHROMAT_FILE:
MSMg01no402_k11.g1 PHD_FILE: MSMg01no402_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:16:38 2005
(433 letters)
>mm_chr15_62886065_62886898
Length = 834
Score = 611 bits (316), Expect = e-179
Identities = 349/360 (96%), Gaps = 1/360 (0%)
Strand = Plus / Minus
Query: 75 tatatattggatattagtgtcctatcagatttaggattggtagagatcttttcccaatct 134
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tatatattggatattagtctcctatcagatttaggattggtagagatcttttcccaatct 772
Query: 135 gttggtggcctttttgtcttattgacagagtcttttgccttacagaaactttgcaatttt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gttggtggcctttttgtcttattgacagagtcttttgccttacagaaactttgcaatttt 712
Query: 195 atgaggtcccatttgtcgattcttgatagtcattggtattctgttcataatttttcctct 254
||||||||| ||||||||||||||||||| ||| ||||||||||||| ||||||||||||
Sbjct: 711 atgaggtccaatttgtcgattcttgatagccataggtattctgttcagaatttttcctct 652
Query: 255 gtgcccatatctttgagagggaaaacaaactattaaatgtaatagttatgctactactat 314
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 651 gtgcccatatctttgagagggaaaacaaactattacatgtaatagttatgctactactat 592
Query: 315 ctttctgctatttttgttatatttaacttatttgattttgcttttagatagtatactttt 374
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ctttctgctatttttgttatgtttaacttatttgattttgcttttagatagtatactttt 532
Query: 375 ctgcatcttctctttgattat-aggtgccccaacactggctaactcacctgattttttaa 433
||||||||||||||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct: 531 ctgcatcttctctttgattataaagttacccaacactggctaactcacctgattttttaa 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 834
Length adjustment: 9
Effective length of query: 424
Effective length of database: 825
Effective search space: 349800
Effective search space used: 349800
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
