Query= MSMg01no404_j21.b1 MSMg01no404_j21.b1 CHROMAT_FILE:
MSMg01no404_j21.b1 PHD_FILE: MSMg01no404_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:21 2005
(443 letters)
>mm_chr15_51884939_51885781
Length = 843
Score = 772 bits (399), Expect = 0.0
Identities = 432/443 (97%)
Strand = Plus / Plus
Query: 1 agtaccctgatgtctggccactgtattattctgtgagaccctttaaactgagctcttaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtaccctgatgtctggccactgtattattctgtgagaccctttaaactgagctcttagc 260
Query: 61 tttctaagttcaattctatacacaattttaggaaagagtttgtgatattacttgtaacct 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttctaagttaaattctatacacaattttaggaaagagtttgtgatattacttgtaacct 320
Query: 121 cgttatatctctttttaacgtttcaacttaagtgcaggaacagacatcctcaagtacatt 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cgttatatctctttttaacgtttcaacttaagtgcaggaacagacattctcaagtacatt 380
Query: 181 aaggttaacctcgataaatcagttgatcctgttttcagaggatggtcgttctataagcgg 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 381 aaggttaacctcgataaatcagttgatcttgttttcagaggatggtcgttctataagtag 440
Query: 241 ggcactgtacagagtgtatgttactgacactggttagtacttcattacataatttggttc 300
|||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcactttacagagtgcaggttactgacactggttagtacttcattacataatttggttc 500
Query: 301 cattggtcatgcatgctgacataaaaagaaagaaaacctgagacagttttgaaagtcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattggtcatgcatgctgacataaaaagaaagaaaacctgagacagttttgaaagtcgat 560
Query: 361 gacttaacattgtcaggcaaaaagggaaaatattccttattttattgtgaagtcttgtca 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 gacttaacattgtcaggcaaaaagggaaaatattccttattttactgtgaagtcttgtca 620
Query: 421 caaacttttcttctattttcaga 443
|||||||||||||||| ||||||
Sbjct: 621 caaacttttcttctatcttcaga 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_j21.g1 MSMg01no404_j21.g1 CHROMAT_FILE:
MSMg01no404_j21.g1 PHD_FILE: MSMg01no404_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:21 2005
(495 letters)
>mm_chr15_52073676_52074571
Length = 896
Score = 913 bits (472), Expect = 0.0
Identities = 490/496 (98%), Gaps = 1/496 (0%)
Strand = Plus / Minus
Query: 1 tccatcctataagcaaaatgataactttttccccaagtgcttttttgtgttttgagactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tccatcctataagcaaaatgataactttttccccaagtgcttttttgtgttttgagactt 637
Query: 61 tgcctccttcgccacagccaagggaaataagccaatttcagcatattattttgtgctctg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgcctcctttgccacagccaagggaaataagccaatttcagcatattattttgtgctctg 577
Query: 121 gggaaagaaagatgggttagtgcagcctacctcgcactgctgaaaccacagcctgagttt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 576 gggaaagaaagatgggttagtgcagtctacctcgcactgctgaaaccacagcctgagttt 517
Query: 181 tctacctcctggcccagtccttgacctttatc-tgagtctcaaggactgtttcatatgct 239
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 516 tctacctcctggcccagtccttgacctttatcttgagtctcaaggactgtttcatatgct 457
Query: 240 cttcctcccacacagtacttcaatcttgttacatggtaggctggggctgtgctgcaagca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cttcctcccacacagtacttcaatcttgttacatggtaggctggggctgtgctgcaagca 397
Query: 300 gaatactagctgtcctgaataagtcatgaggtaaagggctttattaagagtaaagagata 359
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaatacttgctgtcctgaataagtcatgaggtaaagggctttattaagagtaaagagata 337
Query: 360 acacagcagaatttagtaaacttctctcaacagggctgagacccttggtgttagacctct 419
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 336 acacagcagaatttagtaaaattctctcaacagggctgagacccttggtgttagacttct 277
Query: 420 ttctaacatagaagggttttggttcagcccccaatgttacaaaggaacaaacaagcaaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttctaacatagaagggttttggttcagcccccaatgttacaaaggaacaaacaagcaaac 217
Query: 480 attttgcaactagttg 495
||||||||||||||||
Sbjct: 216 attttgcaactagttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 896
Length adjustment: 10
Effective length of query: 485
Effective length of database: 886
Effective search space: 429710
Effective search space used: 429710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
