Query= MSMg01no405_c09.b1 MSMg01no405_c09.b1 CHROMAT_FILE:
MSMg01no405_c09.b1 PHD_FILE: MSMg01no405_c09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:03 2005
(452 letters)
>mm_chr15_42465857_42466708
Length = 852
Score = 675 bits (349), Expect = 0.0
Identities = 391/407 (96%), Gaps = 6/407 (1%)
Strand = Plus / Minus
Query: 1 ttgtatatgctacagactgaaacatacaacatattacacaggtcaataatttatatcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttgtatatgctacagactgaaacatacaacatattacacaggtcaataatttatatcatg 344
Query: 61 ggtaaataatggacccaagccaaaactgaggaggaggaaatccacgatttattcgttgtt 120
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 343 ggtaaataatggacccaagccaaaacttaggaggaggaaatccaggatttattcgttgtt 284
Query: 121 tcactgatctcctctcagaaggttaggagtgatggaggattttagtaactgatgaccgtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 283 tcactgatctcctctcagaaggttaggagtgatggaggattttagtaactgatggccgtt 224
Query: 181 atttatttttggagggggtgggggcgagacagggtttctctgtatagccctgactgtcct 240
||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||
Sbjct: 223 atttatttttggagggggt-ggggtgagacagggtttctctgtatagccctggctgtcct 165
Query: 241 ggaactc--tttctttgtagaccagactggcctcgaactcagaaatctgcctgggattaa 298
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 164 ggaactcaa---ctttgtagaccagactggcctcgaactcagaaatccgcctgggattaa 108
Query: 299 agcgctgggattaaaggcatgcaaatttagaagtagtactgaagtgatgggaggtttctt 358
|| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 107 agtgctgggattaaaggcgtgcaaatttggaagtagtactgaagtgatgggaggtttctt 48
Query: 359 attatgcagaaaataccctttctaataattttaccacagcattgctg 405
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 47 attatgcagaaaataccctttctaataattttaccacatcattgctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_c09.g1 MSMg01no405_c09.g1 CHROMAT_FILE:
MSMg01no405_c09.g1 PHD_FILE: MSMg01no405_c09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:03 2005
(335 letters)
>mm_chr15_42294584_42295315
Length = 732
Score = 559 bits (289), Expect = e-164
Identities = 323/339 (95%), Gaps = 11/339 (3%)
Strand = Plus / Plus
Query: 1 ctaaaaattcaaacatttcttgctaaacagttggctttgtaaacttatttttttttcctt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 ctaaaaatttaaacatttcttgctaaacagttggctttgtaaacttatttttttt-cctt 259
Query: 61 tcaggaggaagcaactgaagagaaaaacactgtaagttgcctttagaaaccaaattttaa 120
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 260 tcaggaggaagcaactgaagagaaaaacactgcaagttgcctttggaaaccaaattttaa 319
Query: 121 tttcatgcacctcacctagaaaactttctaaatgagcagtttgactacaaggaagcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttcatgcacctcacctagaaaactttctaaatgagcagtttgactacaaggaagcaata 379
Query: 181 tggatattggagaagtagggggagggagaaaaaccatctaatggccacgtgtgatgaagc 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 tggatattggagaagtagggggagggagaaaa-ccatctaatggccacgtgtgatgaagc 438
Query: 241 atattttta----ctgcttcctcaataagttgacagataggccaaaagggggaaatggaa 296
| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aga-----aacaactgcttcctcaataagttgacagataggccaaaagggggaaatggaa 493
Query: 297 gtaggttcccacattagtaaactgttgggtagtttatca 335
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtgggttcccacattagtaaactgttgggtagtttatca 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 732
Length adjustment: 9
Effective length of query: 326
Effective length of database: 723
Effective search space: 235698
Effective search space used: 235698
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
