Query= MSMg01no405_d22.b1 MSMg01no405_d22.b1 CHROMAT_FILE:
MSMg01no405_d22.b1 PHD_FILE: MSMg01no405_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:10 2005
(188 letters)
>mm_chr15_19616090_19616676
Length = 587
Score = 281 bits (145), Expect = 3e-80
Identities = 175/185 (94%), Gaps = 1/185 (0%)
Strand = Plus / Minus
Query: 4 ggaattccttactttcttcacacttctctttcatgttacactgatcaaggttctctgcca 63
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggaattccttactttcgt-agacttctctttcatgttacactgatcaaggttctctgcca 329
Query: 64 atcctaagctaagaacagtgcaaggtggcagtttccccccacagtatatgatggctttag 123
||||||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 328 atcctaaactaagaaaagtgcaaggtggcagttttcccccacagaatatgatggctttag 269
Query: 124 ggtagggtggttttgttttcttttctcttctctattatatttgtatattcttcacattat 183
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 268 ggtagggcagttttgttttcttttctcttctctatcatatttgtatattcttcacattat 209
Query: 184 ttgca 188
|||||
Sbjct: 208 ttgca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 587
Length adjustment: 8
Effective length of query: 180
Effective length of database: 579
Effective search space: 104220
Effective search space used: 104220
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no405_d22.g1 MSMg01no405_d22.g1 CHROMAT_FILE:
MSMg01no405_d22.g1 PHD_FILE: MSMg01no405_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:10 2005
(435 letters)
>mm_chr15_19400456_19401290
Length = 835
Score = 841 bits (435), Expect = 0.0
Identities = 435/435 (100%)
Strand = Plus / Plus
Query: 1 tcatgtaaatgtaattgctatattgccttttaattcctcagtgtggaaaatgaatacgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgtaaatgtaattgctatattgccttttaattcctcagtgtggaaaatgaatacgtt 260
Query: 61 taagtcagttcatttcacaaggtacttcaggactatgagttttaccaggctgtggtcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagtcagttcatttcacaaggtacttcaggactatgagttttaccaggctgtggtcagt 320
Query: 121 gctatgcatccatattgttaatacaagcagcatgggtttatacacttgaatctaaccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctatgcatccatattgttaatacaagcagcatgggtttatacacttgaatctaaccatt 380
Query: 181 gtgaaccatgtataaaggacctcaaaaagatgtctgttttaagtagttacttgatataca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgaaccatgtataaaggacctcaaaaagatgtctgttttaagtagttacttgatataca 440
Query: 241 tagaatacagacaaaaataataattcaaattgtaggtataatgagtttctgactaaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagaatacagacaaaaataataattcaaattgtaggtataatgagtttctgactaaataa 500
Query: 301 taagttattgtgatttcaggatgcatagtggagttcataatgtttcagaatataatctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagttattgtgatttcaggatgcatagtggagttcataatgtttcagaatataatctga 560
Query: 361 ttgctaaatcgatgtacaactatataactaagaaaagggttcaccatggagagagtggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgctaaatcgatgtacaactatataactaagaaaagggttcaccatggagagagtggat 620
Query: 421 gacagggaaaaaaaa 435
|||||||||||||||
Sbjct: 621 gacagggaaaaaaaa 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
