Query= MSMg01no405_h07.b1 MSMg01no405_h07.b1 CHROMAT_FILE:
MSMg01no405_h07.b1 PHD_FILE: MSMg01no405_h07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:27 2005
(500 letters)
>mm_chr15_60480958_60481857
Length = 900
Score = 853 bits (441), Expect = 0.0
Identities = 471/481 (97%), Gaps = 1/481 (0%)
Strand = Plus / Plus
Query: 21 tgacatttaatgtacaacactaagagatatattactattagaaacattttctgcagaaaa 80
||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 220 tgacatttaatgtgcaacactaggagatatattaatattagaaacattttctgcagaaaa 279
Query: 81 -cattaagtaaattagaatataatgtctggatctctcttctcttaagaataaacattttg 139
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 acattaagtaaattagaatataatgtctggatctctcttctcttaagaataaacattttg 339
Query: 140 atgggcagtggtgctgcatacatttaatcccagaaccctagaggcagaggcagtaggttc 199
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 340 ctgggcagtggtgctgcatacatttaatcccagaaccctagaggcagaggcagtaggatc 399
Query: 200 tctgaaagtaattttcaggacagccaaggctacacagagaaaccctgtcttggaaaacaa 259
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 400 tctgaaagtaattttcaggacagccaacgctacacagagaaaccctgtcttggaaaacaa 459
Query: 260 gcaagcaagcaaacaaacaaacaaacatgttattgagtgtaatttaagtttgtcctagca 319
|||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 460 gcaagcaaacaaacaaacaaacaaacatgttattgggtataatttaagtttgtcctagca 519
Query: 320 gctccattttgtatttattgtataaaagcagacatcaacgatagttgaatgagtgagact 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gctccattttgtatttattgtataaaagcagacatcaacgatagttgaatgagtgagact 579
Query: 380 aagtatattctaataatatatattctgataagtacatctaaactttaatttatgggtctg 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aagtatattctaataatatatattctgataagtacatctaaactttaatttatgggtctg 639
Query: 440 gaaaattaaattttacctcaactttagcattcaaaagctttcattctttaatttttgttt 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gaaaattaaattttacctcaactttagcattcaaaagctttcattctttaatttttgttt 699
Query: 500 g 500
|
Sbjct: 700 g 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_h07.g1 MSMg01no405_h07.g1 CHROMAT_FILE:
MSMg01no405_h07.g1 PHD_FILE: MSMg01no405_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:27 2005
(502 letters)
>mm_chr15_60669173_60670074
Length = 902
Score = 940 bits (486), Expect = 0.0
Identities = 498/502 (99%)
Strand = Plus / Minus
Query: 1 agtggtttggtacagcacactgaaatacgatttatttctcagccataccccccggagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 agtggtttggtacagcacactgaaatacgatttatttctcagccataccccccggagctc 643
Query: 61 caatgattcacatcctccctcggtaattaattcatttgtcaaattagtcaggattcctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 caatgattcacatcctccctcggtaattaattcatttgtcaaattagtcaggattcctgg 583
Query: 121 gtcaccctttgctctatcccactccaggcgatccatatatagaaaggtcaggttccgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gtcaccctttgctctatcccactccaggcgatccatatatagaaaggtcaggttccgcag 523
Query: 181 cccagtggggctatctcctctcaatgcttcggaaatctcagtgggtaggcagaagctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cccagtggggctatctcctctcaatgcttcggaaatctcagtgggtaggcagaagctctt 463
Query: 241 gagatggctgttctggatgaggcttgaggtccaagaagaactaggaatgagaaaagcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gagatggctgttctggatgaggcttgaggtccaagaagaactaggaatgagaaaagcttt 403
Query: 301 gctaaagtagcgagttcaccttgcagaacacacttttcttggcactgacttgtggcaaca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 402 gctaaagtagcgagttcaccttgcagaacacacttttcttggcactgacttgtggcaata 343
Query: 361 gtagcatggacactggctagaacgggtagaacggggaggcgatctgcacacgtgggtctg 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtagcatggacactgactagaacgggtagaacggggaggcgatctgcacacgtgggtctg 283
Query: 421 agtcagtcttgcctgggtccatgttctgttaaaccgcatgcactgagttggtttattcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agtcagtcttgcctgggtccatgttctgttaaaccgcatgcactgagttggtttattcat 223
Query: 481 taggtttcactatcgagatcta 502
|||||||||| | |||||||||
Sbjct: 222 taggtttcaccaccgagatcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
