Query= MSMg01no405_l16.b1 MSMg01no405_l16.b1 CHROMAT_FILE:
MSMg01no405_l16.b1 PHD_FILE: MSMg01no405_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:48 2005
(430 letters)
>mm_chr15_71279859_71280690
Length = 832
Score = 696 bits (360), Expect = 0.0
Identities = 414/432 (95%), Gaps = 2/432 (0%)
Strand = Plus / Plus
Query: 1 ggctgatatgggcccaggaagg-tcaaggtaaccccataatcaacttcagtacaacattg 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggctgatatgggcccaggaaggatcaaggtaaccccataatcaacttcagtacaacattg 260
Query: 60 taacaggacattagctcttcacctttccatggctgaagcaagctgagacctctttgttga 119
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 taacaggatgttagctcttcacctctccatggctgaagcaagctgagacctctttgttga 320
Query: 120 cacctttgcaattcgccatatttgtatgcctagtt-tacctctctttcttcccacaggat 178
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 catctttgcaattcgccatatttgtatgcctagttctacctctctttcttcccacaggat 380
Query: 179 ttatctgaatatgtcctcttggcccagagagacaaaagtataaaagtacaggctataaat 238
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ttatctgaatatgtcctcttggcccagagagacaaaggtataaaagtacaggctataaat 440
Query: 239 gaattggatccaggtttatcaacacttgcttatatgatgcatctgggcaggcctgttgtt 298
|||| ||||||||| ||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 441 gaatcggatccaggggtatcaacacgtgattatatgatgcatctgggcaggcctgttgtg 500
Query: 299 tagcagtgctgtgtaggccaattagttggtggccctgctccctttgcagacatggacaag 358
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 cagcagtgctgtgtaggccaattagttggtggccctgctcccttcgcagacatggacaag 560
Query: 359 tggtccatgattgatgctttcctctactgtggtctctttgatctaggttgagtttttatg 418
||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |
Sbjct: 561 tggtccatgattgatgctttcctctactgtggtctctatgatctaggctgagtttttacg 620
Query: 419 ctactctttgca 430
||||||||||||
Sbjct: 621 ctactctttgca 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 832
Length adjustment: 9
Effective length of query: 421
Effective length of database: 823
Effective search space: 346483
Effective search space used: 346483
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_l16.g1 MSMg01no405_l16.g1 CHROMAT_FILE:
MSMg01no405_l16.g1 PHD_FILE: MSMg01no405_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:48 2005
(400 letters)
>mm_chr15_71466327_71467126
Length = 800
Score = 766 bits (396), Expect = 0.0
Identities = 399/400 (99%)
Strand = Plus / Minus
Query: 1 ctgaatatcctgtacattctccccttatacctctcattcattctatggtttcatgattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctgaatatcctgtacattctccccttatacctctcattcattctatggtttcatgattat 541
Query: 61 ctgatgcaattcctccatgttttgagattctgttgtctcctttacatctcttattccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ctgatgcaattcctccatgttttgagattctgttgtctcctttacatctcttattccaag 481
Query: 121 cttagttgctgatacaacatgggcttttagtagttaatatgaattttcgctaaatgactg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 480 cttagttgctgatacaacatgggcttttagtagttaatacgaattttcgctaaatgactg 421
Query: 181 agcagattcatcatctattcatgcctaggaaagaggtctacacagtcttcgtggggacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agcagattcatcatctattcatgcctaggaaagaggtctacacagtcttcgtggggacat 361
Query: 241 atattaaagaagattgttttttaaaagtaaaaggcataagttcataattaattcatgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atattaaagaagattgttttttaaaagtaaaaggcataagttcataattaattcatgcca 301
Query: 301 aaaataggttgatcattgtcgtataatgattaacagctaagtcagtatgaaggttttaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aaaataggttgatcattgtcgtataatgattaacagctaagtcagtatgaaggttttaac 241
Query: 361 tttaagttcatctgattcacagttgaaggaagttaccaag 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tttaagttcatctgattcacagttgaaggaagttaccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
