TTACATCAAAATTTGCGGCGCTAAAAGAACACTAATACTACGCGAGGGCN
GGAATCACAGGTTACGAAACAGTATAAGNNAANGGCTNNCCTGGNTATTG
TTGTAAAGGAAGTATATTTCCCAAACAAGCATCATTTTCTTCCAAGACTA
TCTTTGTCTTGCTCATTAAAGCAATGTAATTTATGTAAGTATCATCCGTG
ATTTACATTGATAAGCTATGGATGTGAAAGGCTTGCAAATATATTCTTTT
GTATTTTTATGTTTATTTATTTAACAAATCACAGAGGTATGTAAGACCAT
CTTAGTGTGCGTATTTTTTTTATTTACACCCTGCCTCAAAGATATCTTGA
AAATAGCTTGAGATCACTCCCCGCCATCTTTATTTTTTTAAATGAATTGC
TAAATTTAATCCTGCCCTTGAAATCATGTTCTGCCAATTACTGTCCTAAG
TTAGTACAGAATGGCAACATTTGTTGCTATTTTATGTGCCCACCTTCCTT
TGAATTAACTGTTTAACTCCATGTAATATGTACCAGTGCGTACCGCTACC
TGTGTCTGTATTCCCTCCTTCTCATCACCCTCAATACATCCCTTCGCTAC
ACCATGTATTGCTTGTTGTCCTTCCCCCCTTTTCTCCTTTTCCCACCTAA
CGTTTTTTTTCTATTCTCTATCTTCCCTCCCCCTTTGCCTGCACCACCTC
TTGTCCTCCCTCTTTCCTCTGTCTCTCTCCCCTTCTTTCTCTCCTTCCCC

NTTTCCGATGAAGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACGACTCAGCAACTGTGTGT
GATGTTTTCTCTCTAATTGCCATAGAACATTTGGTTCTCTAGACACTCTG
CTGTCACTAAACCACCGCAATTTCATGCATGGGGACTTGCTTAGCAAAAA
TATTTTCAAAAAGAACAAGGACAGCTGTCAAAGATTATCGTAACCTTTGC
AATGTGAAGAATCATGAAATCTGCTACTGGATATCTTCATGGGTGAGGTG
GGAACCAGTTTTAACACTTCAATATTTACCTCAGGCTCTGTAATGTATCT
ATTCTCTTGCATACATTTTGTACATGGTGTAGCCCGTTAATAAGCCATGC
TTGCTTGTATGGTTTTCAAAACCTCTACTCTCAGGAAGTAGGGCAGGGGA
ACATCCATTTTTGCTAATTCTTCTTGGAGAAGACAGAGCATCAAGGATGA
AGCGTGAGAACATAATCCAGTGTTAATGCCACTTAATGAATGAGCTTATG
AATTTGTGTGCTTTCCATCACAGGAGGGCTTACAGCCTTCACTTCCTTGA
GACTTGGCTCAAGGGAAAGTTTTATTCACAAATGTGGTTATGACATACCT
ATTTATCAATATCTAAATGTATCTGGCGATAACTGTGCATACGCCCTGCT
ATATGATTCTTCCTTGTGAACTGAATTTCCCCCACATTTCG

Query= MSMg01no405_p02.b1 MSMg01no405_p02.b1 CHROMAT_FILE:
MSMg01no405_p02.b1 PHD_FILE: MSMg01no405_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:05 2005
         (155 letters)



>mm_chr15_30317985_30318539
          Length = 555

 Score =  284 bits (147), Expect = 1e-81
 Identities = 153/155 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcatcattttcttccaagactatctttgtcttgctcattaaagcaatgtaatttatgtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatcattttcttccaagactatctttgtcttgctcattaaagcaatgtaatttatgtaa 260

                                                                       
Query: 61  gtatcatccgtgatttacattgataagctatggatgtgaaaggcttgcaaatatattctt 120
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 gtatcatccgtgatttacattgataagctatggatgtgaaaggtttgcaaatatattctt 320

                                              
Query: 121 ttgtatttttatgtttatttatttaacaaatcaca 155
           ||||| |||||||||||||||||||||||||||||
Sbjct: 321 ttgtagttttatgtttatttatttaacaaatcaca 355


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space:    80409
Effective search space used:    80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no405_p02.g1 MSMg01no405_p02.g1 CHROMAT_FILE:
MSMg01no405_p02.g1 PHD_FILE: MSMg01no405_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:05 2005
         (520 letters)



>mm_chr15_30477541_30478460
          Length = 920

 Score =  975 bits (504), Expect = 0.0
 Identities = 516/520 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacgactcagcaactgtgtgtgatgttttctctctaattgccatagaacatttggttctc 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 720 aacgactcagcaactgtgtgtgatgctttctctctaattgccatagaacatttggttctc 661

                                                                       
Query: 61  tagacactctgctgtcactaaaccaccgcaatttcatgcatggggacttgcttagcaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tagacactctgctgtcactaaaccaccgcaatttcatgcatggggacttgcttagcaaaa 601

                                                                       
Query: 121 atattttcaaaaagaacaaggacagctgtcaaagattatcgtaacctttgcaatgtgaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 atattttcaaaaagaacaaggacagctgtcaaagattatcgtaacctttgcaatgtgaag 541

                                                                       
Query: 181 aatcatgaaatctgctactggatatcttcatgggtgaggtgggaaccagttttaacactt 240
           |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 540 aatcatgaaatccgctactggatatcttcaagggtgaggtgggaaccagttttaacactt 481

                                                                       
Query: 241 caatatttacctcaggctctgtaatgtatctattctcttgcatacattttgtacatggtg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caatatttacctcaggctctgtaatgtatctattctcttgcatacattttgtacatggtg 421

                                                                       
Query: 301 tagcccgttaataagccatgcttgcttgtatggttttcaaaacctctactctcaggaagt 360
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 420 tagcccgttaataagccatgctggcttgtatggttttcaaaacctctactctcaggaagt 361

                                                                       
Query: 361 agggcaggggaacatccatttttgctaattcttcttggagaagacagagcatcaaggatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agggcaggggaacatccatttttgctaattcttcttggagaagacagagcatcaaggatg 301

                                                                       
Query: 421 aagcgtgagaacataatccagtgttaatgccacttaatgaatgagcttatgaatttgtgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagcgtgagaacataatccagtgttaatgccacttaatgaatgagcttatgaatttgtgt 241

                                                   
Query: 481 gctttccatcacaggagggcttacagccttcacttccttg 520
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gctttccatcacaggagggcttacagccttcacttccttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space:   464100
Effective search space used:   464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)