Query= MSMg01no406_d18.b1 MSMg01no406_d18.b1 CHROMAT_FILE:
MSMg01no406_d18.b1 PHD_FILE: MSMg01no406_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:28 2005
(521 letters)
>mm_chr15_19290260_19291180
Length = 921
Score = 984 bits (509), Expect = 0.0
Identities = 518/521 (99%)
Strand = Plus / Minus
Query: 1 ggataccttaaactttcagtagtttcttctctttattagcgtttttaaaaataattaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 ggataccttaaactttcagtagtttcttctctttattagcgtttttaaaaataattaact 734
Query: 61 attttttatattctggaaatacacatgtgtcccagtttcacaagaaggcaacatacatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 733 attttttatattctggaaatacacatgtgtcccagtttcacaagaaggcaacataaatat 674
Query: 121 gctttctgttttatcagtgcaaacagaaattaatacttgcattagagcatcatagataaa 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gctttctgttttaccagtgcaaacagaaattaatacttgcattagagcatcatagataaa 614
Query: 181 attgacagaactttctgtagcaaacatccacacttctactcacgagaaggtggcatgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 attgacagaactttctgtagcaaacatccacacttctactcacgagaaggtggcatgatc 554
Query: 241 gtctttactacatttccaattgaaaagttgtcaatattacaaacagaactagcttgctat 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtctttacaacatttccaattgaaaagttgtcaatattacaaacagaactagcttgctat 494
Query: 301 cataaactcctcagtgagtttctatatttaactgtccccagctgtgatgcatcatctagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cataaactcctcagtgagtttctatatttaactgtccccagctgtgatgcatcatctagt 434
Query: 361 tctgattttctaacaggtctgagaaggaaagagcagctactgccacagccatttcctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctgattttctaacaggtctgagaaggaaagagcagctactgccacagccatttcctctg 374
Query: 421 attgcgcaggaatgccacctagtgtcacaacagttactgagtcctagctgctttctcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 attgcgcaggaatgccacctagtgtcacaacagttactgagtcctagctgctttctcaaa 314
Query: 481 gaatttaacattccacagcacagtgcagccatacttttcac 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaatttaacattccacagcacagtgcagccatacttttcac 273
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_d18.g1 MSMg01no406_d18.g1 CHROMAT_FILE:
MSMg01no406_d18.g1 PHD_FILE: MSMg01no406_d18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:28 2005
(502 letters)
>mm_chr15_19105545_19106448
Length = 904
Score = 803 bits (415), Expect = 0.0
Identities = 483/507 (95%), Gaps = 8/507 (1%)
Strand = Plus / Plus
Query: 1 ttagaataattatggttttaactattccttgtggttgtgctcatctcttttttaaaaaat 60
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ttagaataattatggttttaattattccttgtggttgtgctcatctcttttttaaataac 260
Query: 61 gatttatttatcttaagtatatgaatacactatagctgtcttcagacacaccagaagaca 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatttatttatcttatgtatatgaatacactatagctgtcttcagacacaccagaagaca 320
Query: 121 gtctcagatcccattacagaaggttgtaagctaccatgtggttgctgggaattgaactcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctcagatcccattacagaaggttgtaagctaccatgtggttgctgggaattgaactcg 380
Query: 181 ggacctctggaagaatagtcagtgctcttaactgctgtgccatttctccagcccctgtgc 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 381 ggacctctggaagaatagtcagtgctctaaactgctgtgccatttctccagcccctatgc 440
Query: 241 tcatctcttaagctctgtctgcacacaagagatcttttcatctcactgtcaattggacag 300
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 441 tcatctcttaagctctgtcttcacacaagagattttttcatctcactgtcaattgtacag 500
Query: 301 caacactaaccaaggca-tggttttatttcaacagcagcaacaaccagagaaattgaact 359
|||||||||||||| | || |||||||||||||||||||||||||||||| | ||||||
Sbjct: 501 taacactaaccaaggaactg-ttttatttcaacagcagcaacaaccagagatactgaact 559
Query: 360 cacttg--gctcattctcctctaatgtgttttttt-gttcttgcttttcatttttaccat 416
||| | | ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 cac--gaaggtcattctcctctaatgtgttttttttgttcttgcttttcatttttaccat 617
Query: 417 aaataatttaaacaattttgtcgtatttttt-gtccttaatacttttaaagaaaattaat 475
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 618 gaataatttaaacaattttgtcgtatttttttgtccttaatacttttaaagaaaattaat 677
Query: 476 aaattccacatgaataatttatgatca 502
||||||||||||||||| |||||||||
Sbjct: 678 aaattccacatgaataaattatgatca 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 904
Length adjustment: 10
Effective length of query: 492
Effective length of database: 894
Effective search space: 439848
Effective search space used: 439848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
