Query= MSMg01no406_f22.b1 MSMg01no406_f22.b1 CHROMAT_FILE:
MSMg01no406_f22.b1 PHD_FILE: MSMg01no406_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:39 2005
(549 letters)
>mm_chr15_7327882_7328830
Length = 949
Score = 884 bits (457), Expect = 0.0
Identities = 478/485 (98%)
Strand = Plus / Minus
Query: 1 ttccccatgattttcaggggagatatctgtaccgtggtatgaaacacagttattttatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttccccatgattttcaggggagatatctgtaccgtggtatgaaacacagttattttatgc 426
Query: 61 aaccactagttcactggtaaactgctggggttttcgatctgagaagcaccatcgatgttc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 425 aaccactagttcactggtaaactgctggggtttttgatctgagaagcaccatcgatgttc 366
Query: 121 acagaaacaaataaaccaaagcattttattcatttgttctgaggtcaatagatttcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acagaaacaaataaaccaaagcattttattcatttgttctgaggtcaatagatttcagtt 306
Query: 181 ttcattgcgtaagtcatgccttgttgagacgctggttcatagatcactgattgctatgat 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttcattgcataagtcatgccttgttgagacgctggttcatagatcactgattgctatgat 246
Query: 241 gggaaagaattcttctttgcatttaaagacacactttcatacaacaataacaactaatgt 300
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 245 gggaaagaattcgcctttgcatttaaagacacactttcatacaacaataataactaatgt 186
Query: 301 ttatacagtgcttggtgtgtgtcaggcaatggaagtaacagtctagtttcataagactgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttatacagtgcttggtgtgtgtcaggcaatggaagtaacagtctagtttcataagactgg 126
Query: 361 gattataggaccataagattttaacaggaagtttagggtgactgtgttctgttgcagatg 420
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 125 gattatagggccataagattttagcaggaagtttagggtgactgtgttctgttgcagatg 66
Query: 421 agccacttgcctaaggacatcatggatagactgtgctctaggaccccagctgtctgcacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 agccacttgcctaaggacatcatggatagactgtgctctaggaccccagctgtctgcacc 6
Query: 481 atgct 485
|||||
Sbjct: 5 atgct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_f22.g1 MSMg01no406_f22.g1 CHROMAT_FILE:
MSMg01no406_f22.g1 PHD_FILE: MSMg01no406_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:39 2005
(350 letters)
>mm_chr15_7158089_7158838
Length = 750
Score = 615 bits (318), Expect = e-180
Identities = 342/350 (97%)
Strand = Plus / Plus
Query: 1 gagcacaaaagcaatgtgagtgagtcccttcctgccacctcagccatgagtcaaaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 gagcacaaaagcaatgtgagtgagtcccttcctgccacctcagccatgagtcagaagttc 260
Query: 61 aaaacatggaaaaatggatgatttggacggcttcctgattcccaggtatatgactgaccc 120
| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacatggaagaatggacgatttggacggcttcctgattcccaggtatatgactgaccc 320
Query: 121 tgtggagtagacagccccgggacaacaaataaagctctaatgaggggaaggaggaaaggc 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 tgtggagtagacagccccgggacaacaaataaagctctaatgagggaaaggaggaaaggc 380
Query: 181 ctgacagattaagcttcggtcaaggtcacttacccacgtacagagccccgttgatgttaa 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ctgacagattaagcttcggtcaaggtcacttacccacgtacagagcaccgttgatgttaa 440
Query: 241 gctgccgcatcatgcccggtgacttgcctgttctggctccgtagtcatccactgtaatct 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgccgcatcaagcccggtgacttgcctgttctggctccgtagtcatccactgtaatct 500
Query: 301 tcccggactggccatccctgcaaagtaaaggaaaccgaaacccgacaaga 350
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 tcccggactggccatccctgcaaagcaaaggaaaccgaaacccgacaaga 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
