Query= MSMg01no406_l22.b1 MSMg01no406_l22.b1 CHROMAT_FILE:
MSMg01no406_l22.b1 PHD_FILE: MSMg01no406_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:10 2005
(527 letters)
>mm_chr15_37610516_37611443
Length = 928
Score = 917 bits (474), Expect = 0.0
Identities = 512/526 (97%), Gaps = 5/526 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgtt--tttcgtcgggtgggaagcgtgtcggctgacaatgacaggacatttg 62
|||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 728 gaattctctgttcatt--gtcgggtgggaagcgtgttggctggcaatgacaggacatttg 671
Query: 63 ctcttcagcctttaatgtctaatccttggactccgaacttgaaagtctttttcccagttt 122
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 670 ctcttcagcctttaatgtctaatctttggactccgaacttgaaagtctttttcccagttt 611
Query: 123 gagagtcacatattttgagagctggaaggaacctctataataatcttaacccaaactcct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gagagtcacatattttgagagctggaaggaacctctataataatcttaacccaaactcct 551
Query: 183 ggt-ggggaaaatgtcatccacaaagagagtttaagcaacatagttacggtcttttggtt 241
||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 550 ggtgggggaaaatgtcatccacaaagagggtttaagcaacatagttacggtctttcggtt 491
Query: 242 ggctaattagtgaactctctgccccagatgatcttgtgtagagaatggtctaccttcctc 301
||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 490 ggctaattagtgaactctctgccccagatgaacttgtgtagagaatggcctaccttcctc 431
Query: 302 ttttattttccaaataacctccctctgttatttgccaaagtcttatttacttgatagagt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 430 ttttattttccaaataacctccctctgttatttgccaaagtcttatttacttgttagagt 371
Query: 362 ctctaggaattagtcccaaccattgggaagacaacaagtgcttttctagggaaactaatt 421
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctctaggaattagtcccaatcattgggaagacaacaagtgcttttctagggaaactaatt 311
Query: 422 tttgcttctttccagagggatttttcactctaacccagcatgactccctactttcacagc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttgcttctttccagagggatttttcactctaacccagcatgactccctactttcacagc 251
Query: 482 tcagcatgacatctctctaatagccttcctcctagttggacatcag 527
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tcagcatgacatctctctaatagccttcctcctagttggacatcag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 928
Length adjustment: 10
Effective length of query: 517
Effective length of database: 918
Effective search space: 474606
Effective search space used: 474606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_l22.g1 MSMg01no406_l22.g1 CHROMAT_FILE:
MSMg01no406_l22.g1 PHD_FILE: MSMg01no406_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:10 2005
(436 letters)
>mm_chr15_37469166_37470001
Length = 836
Score = 828 bits (428), Expect = 0.0
Identities = 434/436 (99%)
Strand = Plus / Plus
Query: 1 cactctctgggtcattggggtttcccatcccacactggggcaatcccaacatggacgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactctctgggtcattggggtttcccatcccacactggggcaatcccaacatggacgtaa 260
Query: 61 cagagtacagcataaagaaattctgtcacaagggttgagcaaactcatgggaggagcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagtacagcataaagaaattctgtcacaagggttgagcaaactcatgggaggagcaga 320
Query: 121 gggaacaaagaactcgtggaattctgggaggagaccgggaagacacagcctgagctaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaacaaagaactcgtggaattctgggaggagaccgggaagacacagcctgagctaagt 380
Query: 181 aaggccctggcactgtctcagaaacacctggaaaggtcacgagtttccattggagacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggccctggcactgtctcagaaacacctggaaaggtcacgagtttccattggagacaac 440
Query: 241 tatgcagtcgtgcagagcacctgatgaacaagactagagctctggcgctctcctttctgt 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggcagtcgtgcagagcacctgatgaacaagactagagctctggcgctctcctttctgt 500
Query: 301 gtctccatgtgatagcttcttgagataggaaaggagggagggacactagtgtcccccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctccatgtgatagcttcttgagataggaaaggagggagggacactagtgtcccccaca 560
Query: 361 gcagcaccttttcctagcagggccgctgcctcctgtcctggcttttcttttgctttggtt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 gcagcaccttttcctagcagggccgctgcctcctgtcctggcttttcttttgttttggtt 620
Query: 421 ttatgtcactgcacta 436
||||||||||||||||
Sbjct: 621 ttatgtcactgcacta 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
