Query= MSMg01no407_a10.b1 MSMg01no407_a10.b1 CHROMAT_FILE:
MSMg01no407_a10.b1 PHD_FILE: MSMg01no407_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:33 2005
(609 letters)
>mm_chr15_7084097_7085106
Length = 1010
Score = 1143 bits (591), Expect = 0.0
Identities = 603/607 (99%), Gaps = 1/607 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagttgtccta-attgtcttgagtaatgctgcatgtgttccttctagacactt 62
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagttgtcatacattgtcttgagtaatgctgcatgtgttccttctagacactt 263
Query: 63 gcactgcccctgctgacgcaggctgaaggtggtgctcacaagccttgcccactcagtgtt 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 gcactgcccctgctgacgcaggctgaaggtggtgctcgcaagccttgcccactcagtgtt 323
Query: 123 gggaggtgaggaggaatttttggcgtatgtttttggtttctaatgtacttttgcacggtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggaggtgaggaggaatttttggcgtatgtttttggtttctaatgtacttttgcacggtg 383
Query: 183 ggaagtttttggctctccttcattcttttggcttctaaggctgaataagttggaattagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaagtttttggctctccttcattcttttggcttctaaggctgaataagttggaattagc 443
Query: 243 attcatgtctagaatcgagcataatcttgttatgtggtggtatcttgaagggccactagg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attcatgtctagaatcgagcataatcttgttatgtggtggtatcttgaagggccactagg 503
Query: 303 gggcaatatttctttctgaaggtccgtgtgtgtctgggttaagccttcatccccgaagca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gggcaatatttctttctgaaggtccgtgtgtgtctgggttaagccttcatccccgaagca 563
Query: 363 cacacttctgtaagaagttcttagatccaaggacagttgacacggtggtagcaggaacat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cacacttctgtaagaagttcttagatccaaggacagttgacacggtggtagcaggaacat 623
Query: 423 ctggtggaaaataacaagtgctgacagaagtacttccctgcttctaacattagaaaacgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctggtggaaaataacaagtgctgacagaagtacttccctgcttctaacattagaaaacgc 683
Query: 483 taacggggcagatgggttgtaattgtcctgtggacagaaccgtgtgagttggctgagccc 542
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 taacggggcagatgggttgtaattgtcctgtggacagaaccttgtgagttggctgagccc 743
Query: 543 tggtggtggtaggatgaaggtgagaccgtggcccacacttacatgctgtaacctctgggg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tggtggtggtaggatgaaggtgagaccgtggcccacacttacatgctgtaacctctgggg 803
Query: 603 ctgtttg 609
|||||||
Sbjct: 804 ctgtttg 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1010
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1000
Effective search space: 599000
Effective search space used: 599000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_a10.g1 MSMg01no407_a10.g1 CHROMAT_FILE:
MSMg01no407_a10.g1 PHD_FILE: MSMg01no407_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:33 2005
(487 letters)
>mm_chr15_7300483_7301369
Length = 887
Score = 841 bits (435), Expect = 0.0
Identities = 474/487 (97%)
Strand = Plus / Minus
Query: 1 gaattcagaatataggatatgtggcaggtcagttagcaagacttggctgtggcattaaaa 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 830 gaattcagaatatagggtatgtggcaggtcagttagcaagacttggctgtggcatgaaaa 771
Query: 61 atctagccagtattctaagagtctgttcaacatgataagtctgctatacatttattcagc 120
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 770 atctagccagtattctaagagtctgttcaacatgatgagtctgctgtacatttattcagt 711
Query: 121 gcctgtaatgtgctgggcactgtaatgtagtaggtatttggtatctctaaatgaaaagag 180
|||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 710 gcctgtgatgtgctgggcactgtaatgtattagatatttggtatctctaaatgaaaagag 651
Query: 181 atacttatgtcctagaggaaagggagaatttaaaacagctgaaaggaaatgtgtgtgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atacttatgtcctagaggaaagggagaatttaaaacagctgaaaggaaatgtgtgtgaag 591
Query: 241 ggattgtgtgtgtatctactatagaacacaagaaacactgacttgactaccaaaaggcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggattgtgtgtgtatctactatagaacacaagaaacactgacttgactaccaaaaggcag 531
Query: 301 ctgaaggtacagggcagggacagatattcataacaatgttacaatgatcaggctggtctc 360
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 530 ttgaaggtacagggcagggacagatattcataacaatgttacaatggtcaggctggtctc 471
Query: 361 agtggggtaaaaagggtaatgaggttactaatgaaaagaatgggtagccaataagcttca 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agtggggtaaaaagggtaacgaggttactaatgaaaagaatgggtagccaataagcttca 411
Query: 421 tgagagagcgaagctgtcaggccacgggagcagcaggaagcactgggagtcatctgactg 480
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgagagagcgaagctgtcataccacgggagcagcaggaagcactgggagtcatctgactg 351
Query: 481 ggctgaa 487
|||||||
Sbjct: 350 ggctgaa 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
