NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGTTGTTTTATTTTTGTATTCTACTAAATACCTAAATGGCTGCC
ATACATTTTCTTTTCATTTGGAAAAGCACCGTTGGGAACAGGAAAGTTTT
GAGGAATCAGTAAGAAACATTACTTTCTTGTCTGAAGTCTCTGACCCCAT
ATTTTCCATTGAAAAAAGAAGAGAGGAAGAATATTCTTATGAACACAGAT
ACCAAGTCAAGGTGCATAGTACAGTAAGAATGATGGAAATGTAGCAACCA
GATGGCTTTGTGAAAAGTGTGTGGAAAGCCAAGTAGCAGGAGTTTGAACA
GCAGGAAGCTCTTGAGTGAGGGTCTTTGCTTTTCCTATGGAGAATAGACA
GGAAAGGGTTTGGAAGTTTCAGCTAATCCCTCTAGCTGCACAGAGATTTG
TCTCAGACACTACCAGTGATGCCCAACAACATTGAAAGATGAAAGACATG
GCCTCTGCAGCTTCCAAAGGAAGAGCAAAGACCACTAGCCCACAACAACC
AGCTCTACCAGAANAGAGGTAGATTAAGTTGTTTAGCAAATATGATTGCC
CAAATTAAGGCATTTTTGATATAAATAGGTTAGGTTGAAAATGTTATAAT
AGAGAAAGTATGATGAAATCTAATCAAACAAAAATCTAAAGTATTACTTG
GAGAAAAAATATCAAACACCAGATTATAAC

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGAAGTCTTTAATATCTTTCT
TTATTTCTTCCCTGACCAAGTTACCATTGAGTAGAGAGTTGTTCAGTTTC
CAGGTGTATGTGGGTTTTCTGTTGTTTTTGTTGTTACTAAAGTCTATCCT
TAGTCTGTGGTGATCTGATGGGATGCATGGGACTATTTCAATCTTCTTAT
AAAGGTTGAGGTTTGTTTTGTGACTAATTATATGGCCAATTTTGAAGAGG
GTTCCATGAGGTGCTGAGAAGAAATTGTATTCTTTTGTTTTCGAGTGAAA
TGTTCTGTATATATCTGTTAAATCCATTTGGTTCATAACCTCTATTAATT
TCATTGTGTCTCTGTTTAGTTTCTGTTTCAGTGACCTGTCCATTAGTGAG
AGTGGAGTGTTGAAGTCTCCCACTATTATTGTGAGGGGTTCAATGTATGT
TTTGAGCTTTAGTAAAGTTTCTTTTATGAATGTGGGTGCCAGGATAGGAG
AGTATGATGAGATACAACTGATTTTCCGTTGTCACTGAGAGTTTGTAATT
TTGGTGAGCTAGGCCAAATCCTTTGAAGTGAATGTTTTTTGGCTTCCTGA
AGAACCCCAGAATGTGTTTTTTCTTTTTCAACCTCGGTTCTATGGTCCGG
TTATGATCTCTTTATTGGGCTTTTAAATACTTTTCTCCACCTTTTTTAGG
TATGATG

Query= MSMg01no407_c21.b1 MSMg01no407_c21.b1 CHROMAT_FILE:
MSMg01no407_c21.b1 PHD_FILE: MSMg01no407_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:45 2005
         (594 letters)



>mm_chr15_10341775_10342768
          Length = 994

 Score = 1104 bits (571), Expect = 0.0
 Identities = 585/590 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgttgttttatttttgtattctactaaatacctaaatggctgccatacattttc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 794 gaattctgttgttttatttttgtattctactaaatacctaaatggctgctatacattttc 735

                                                                       
Query: 65  ttttcatttggaaaagcaccgttgggaacaggaaagttttgaggaatcagtaagaaacat 124
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 734 ttttcatttggaaaagcaccgttgggaacaggaaggttttgaggaatcagtaagaaacat 675

                                                                       
Query: 125 tactttcttgtctgaagtctctgaccccatattttccattgaaaaaagaagagaggaaga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tactttcttgtctgaagtctctgaccccatattttccattgaaaaaagaagagaggaaga 615

                                                                       
Query: 185 atattcttatgaacacagataccaagtcaaggtgcatagtacagtaagaatgatggaaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 atattcttatgaacacagataccaagtcaaggtgcatagtacagtaagaatgatggaaat 555

                                                                       
Query: 245 gtagcaaccagatggctttgtgaaaagtgtgtggaaagccaagtagcaggagtttgaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtagcaaccagatggctttgtgaaaagtgtgtggaaagccaagtagcaggagtttgaaca 495

                                                                       
Query: 305 gcaggaagctcttgagtgagggtctttgcttttcctatggagaatagacaggaaagggtt 364
            ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 494 acaggaagctcttgagtgagggcctttgcttttcctatggagaatagacaggaaagggtt 435

                                                                       
Query: 365 tggaagtttcagctaatccctctagctgcacagagatttgtctcagacactaccagtgat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tggaagtttcagctaatccctctagctgcacagagatttgtctcagacactaccagtgat 375

                                                                       
Query: 425 gcccaacaacattgaaagatgaaagacatggcctctgcagcttccaaaggaagagcaaag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gcccaacaacattgaaagatgaaagacatggcctctgcagcttccaaaggaagagcaaag 315

                                                                       
Query: 485 accactagcccacaacaaccagctctaccagaanagaggtagattaagttgtttagcaaa 544
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 314 accactagcccacaacaaccagctctaccagaaaagaggtagattaagttgtttagcaaa 255

                                                             
Query: 545 tatgattgcccaaattaaggcatttttgatataaataggttaggttgaaa 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tatgattgcccaaattaaggcatttttgatataaataggttaggttgaaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)