Query= MSMg01no407_d08.b1 MSMg01no407_d08.b1 CHROMAT_FILE:
MSMg01no407_d08.b1 PHD_FILE: MSMg01no407_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:47 2005
(519 letters)
>mm_chr15_64041756_64042674
Length = 919
Score = 901 bits (466), Expect = 0.0
Identities = 507/528 (96%), Gaps = 14/528 (2%)
Strand = Plus / Minus
Query: 5 gaattctctcatacttccaagagtagttgtcttagttgacaaactactgtgaccaagagc 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gaattctctcaaacttccaagagtagttgtcttagttgacaaactactgtgaccaagagc 842
Query: 65 ag-ctcgctgggagaaggaagggtttggcccatttccaccccaggccatcatcaaagaaa 123
|| || |||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 841 agcct-gctgggagaaggaagggtttggcccatttccacctcaggccatcatcaaaggaa 783
Query: 124 atcagggcaggagctgaaggcagaaactccagagcgctgcttacttgtatgccctcctgt 183
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 782 atcagggcaggagctgaaggcagaagctccagagcgctgcttactggtatgccctcctgt 723
Query: 184 tgcccctcc------------tgtcgcccctcctgtcttgccttgctcttgcccttgtga 231
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tgcccctcctgtcacccctcttgtcgcccctcctgtcttgccttgctcttgcccttgtga 663
Query: 232 tgtggctcgcttcggatgcacagtaagaaatgcaggtacatatcttgtcacacgtctatg 291
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 662 tgtggctcgcttcggatgcacagtaagaaatgcaggcacatatcttgtcacacgtctatg 603
Query: 292 cagctgtggagtccaccctgtgtgtacctcttttctttcagctctcatgtgacatttctc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 cagctgtggagtccaccctgtgtgtacctcttttctttcagctctcatgtgacatttctc 543
Query: 352 aggcagtctctgcagttgtttggcacttgagggaatggaaccttttagcacatctggagg 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aggcagtctctgcagttgtttggcacttgagggaatggaaccttttagcacatctggagg 483
Query: 412 tgttgtttctggaggggggctgctttaactgaaggacaacaccatctatctagctctcta 471
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgttgtttctggaggggggctgccttaactgaaggacaacaccatctatctagctctcta 423
Query: 472 cagtatgggactcataaaaatacttttacttgtctgcttcttgccact 519
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cagtatgggactcataaaaatacttttacttgtctgcttcttgccact 375
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_d08.g1 MSMg01no407_d08.g1 CHROMAT_FILE:
MSMg01no407_d08.g1 PHD_FILE: MSMg01no407_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:47 2005
(447 letters)
>mm_chr15_63884394_63885245
Length = 852
Score = 797 bits (412), Expect = 0.0
Identities = 440/452 (97%), Gaps = 5/452 (1%)
Strand = Plus / Plus
Query: 1 cattacagtccctggaacgaggtgagagagaagtgggcactgaagttgatgatgtggaac 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 cattacagtccctggaacgaggtgagagagaagtgggcaccaaagttgatgatgtggaac 260
Query: 61 gtctgggctcccactctccttattaggctccatgctgtctcgattttgttcaactataac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctgggctcccactctccttattaggctccatgctgtctcgattttgttcaactataac 320
Query: 121 gtgatagtaaatacaatgtgcctcaccaagtgaccgggagataggctacccaaactcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgatagtaaatacaatgtgcctcaccaagtgaccgggagataggctacccaaactcaaa 380
Query: 181 aggcagaacacacacacacacttccactatccgagggctttcaccagagctgccttcctg 240
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcagaacacacacacacactttcactatccgagggctttcaccagagctgccttccta 440
Query: 241 gtccttggcacctgaatgaagataactgggctgggcttgg-----gtcagccagaagaaa 295
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 gtccttggcaccttaatgaagataactgggctgggcttggcttgggtcagccagaagaaa 500
Query: 296 caaacccagactccccccagctccacactcctcgggccccatagggacttgtgtgagtgg 355
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaacccaaactccccccagctccacactcctcgggccccatagggacttgtgtgagtgg 560
Query: 356 ctgccagacactgtctgctcccccacgggacagcatcacaagcctggagcatgctcagca 415
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 ctgccagacactgtctgctcccccacgggacagcatcacaggcctggagcatgctcagca 620
Query: 416 gctatttgctttattactctgttgaatggcag 447
||||||||||||||||||||||||||||||||
Sbjct: 621 gctatttgctttattactctgttgaatggcag 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 852
Length adjustment: 10
Effective length of query: 437
Effective length of database: 842
Effective search space: 367954
Effective search space used: 367954
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
