NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAATCATACACACCTTGGGAGAGACAGGGAAACACTCAAGA
TGTGCCACATTAAACCCCAATCATACGGATGAAGGAGCCTTAGAGATACT
AAACAAGAAATTGACATGTACCACGGAATTAGGAGCCCCCCCCCCGCACC
CCCCCCCCCGGGAGGGACCACATCCTTTCTTACATCTCTGAATAAGGAGG
GGACTTTATACACTCTTCTAATTTCACAGAGAAGTTCCTAAATTCATCCT
TGTAAGACATGAGCAACGTGGCCATGTACATTCCCAGCATACCCATGAGT
CATCTCTCCTTACCACCTTGAATCACATTAGGAGTCTGCCATCAAAGGTC
TTCATGCTCTGCTGAAATATTTGTAGATTAGTTACTTACATTAGTTACTT
ATCCTTCGGTGTTGCAGACAGTAGGGTAGTATTTTGTATCTTCCATTGTT
CAAAAAAAAAAAAATATGTCCGAANCAGCCAGTAAAATAGCATCAGAAGA
CAAATTAAGTGCTGTGTAGGCTCTGGTTTTCTACAATCCCTTTTACTCTT
TAACTAAACAGGTATCAGCTATGTTACTAAAAAACCCCCAAAGCTGGGCC
TTACAGGAGGTAGGGACAATCCGCTGGGAGTTGGGTTAGTAATTTGAACC
TTTCCTAATTGTGTGGAAAAAAGAACCTCCGCCATTTGACCAAAGA

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGCCCAGAGTTGGCTGAAGGA
CTATCTAGGGCATTGGTGAATAGGCAACATTCTTACTGAATTCTAAGCCC
AGGGTCGGCTCAAGGACTACCTAGGGCATTGGTGAAGGCCAGGAAGCAAA
GTTCGATTTTGCTTAGGTATTTGGCAAGTCATTGCTCAGAGGCACCTACA
ATAAAACAATACTGAAAGGAAGCACACAGATCCATTTGCAAGGACAAAAT
TGGAGCATACGTGCTATGGAATGCCACAGTTCCAGGAGACTAAGTTTCCA
TGAAACTCTTTGCCTCAGGACTGCATCCAGGCTTTTGGCCTGTCATGCAT
GTCACTACTGGAGTGGATGTAGCAATGAAGCCAATGAAGGGAAAGTCAGG
GAAACTCAGCTATTCACCCACTAGTGTTACAGGGTTAAGACATATGCNAT
GAATGTTGGCGTTTAATGAGAAGCCCTAACTGAAATTGGCCCTTTCCTGG
ATCTGTGAAGAAAACAGAAACTTACGTTTACATTCTCCCGAACCGTCCCC
CCCTAAAAAATTAATTCTCTTAACAGGGTATTCTTTACTTTATGGAGTAC
TGGCCCAAAAATGGTCTGTGGCCTCCCCTTCTAAATCCCCCCCCAAGGAT
GGAATTCCCCTCTTCCCGTATATGGAATTTTTATTATTTCCGGGGGGGGG
GGGGGCCCCCCC

Query= MSMg01no407_g22.b1 MSMg01no407_g22.b1 CHROMAT_FILE:
MSMg01no407_g22.b1 PHD_FILE: MSMg01no407_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:04 2005
         (470 letters)



>mm_chr15_90324607_90325477
          Length = 871

 Score =  803 bits (415), Expect = 0.0
 Identities = 446/467 (95%), Gaps = 19/467 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatcatacacaccttgggagagacagggaaacactcaagatgtgccacattaaa 64
           ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 811 gaattcaatcaaacacacctt-ggagagacagggaaacactcaagatgtgccacattaaa 753

                                                                       
Query: 65  ccccaatcatacggatgaaggagccttagagatactaaacaagaaattgacatgtaccac 124
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ccccaatcatacggataaaggagccttagagatactaaacaagaaattgacatgtaccac 693

                                                                       
Query: 125 ggaattaggagccccccccccgcacccccccccccgggagggaccacatcctttcttaca 184
           |||||||||||                 ||||||||||||||||||||||||||||||||
Sbjct: 692 ggaattaggag-----------------cccccccgggagggaccacatcctttcttaca 650

                                                                       
Query: 185 tctctgaataaggaggggactttatacactcttctaatttcacagagaagttcctaaatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tctctgaataaggaggggactttatacactcttctaatttcacagagaagttcctaaatt 590

                                                                       
Query: 245 catccttgtaagacatgagcaacgtggccatgtacattcccagcatacccatgagtcatc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 catccttgtaagacatgagcaacgtggccatgtacattcccagcatacccatgagtcatc 530

                                                                       
Query: 305 tctccttaccaccttgaatcacattaggagtctgccatcaaaggtcttcatgctctgctg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tctccttaccaccttgaatcacattaggagtctgccatcaaaggtcttcatgctctgctg 470

                                                                       
Query: 365 aaatatttgtagattagttacttacattagttacttatccttcggtgttgcagacagtag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aaatatttgtagattagttacttacattagttacttatccttcggtgttgcagacagtag 410

                                                          
Query: 425 ggtagtattttgtatcttccattgttc-aaaaaaaaaaaaatatgtc 470
           ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 409 ggtagtattttgtatcttccattgttcaaaaaaaaaaaaaatatgtc 363


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 871
Length adjustment: 10
Effective length of query: 460
Effective length of database: 861
Effective search space:   396060
Effective search space used:   396060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)