Query= MSMg01no409_a16.b1 MSMg01no409_a16.b1 CHROMAT_FILE:
MSMg01no409_a16.b1 PHD_FILE: MSMg01no409_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:15 2005
(587 letters)
>mm_chr15_72808668_72809654
Length = 987
Score = 1096 bits (567), Expect = 0.0
Identities = 579/583 (99%)
Strand = Plus / Plus
Query: 5 gaattcctcacattcaacgtacactataatcccagctctacatgaaatttggaatgcttt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcacattcaatgtacactataatcccagctctacatgaaatttggaatgcttt 264
Query: 65 gtctcacacagctagctactcagtaagtgagtgaccatgcgtgtcctcatggatccattc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtctcacacagctagctactcagtaagtgagtgaccatgcgtgtcctcatggatccattc 324
Query: 125 ccacattccaaaggcgggggtggcgactgaaggccagagagacaaggagacctgggacag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccacattccaaaggcgggggtggcgactgaaggccagagagacaaggagacctgggacag 384
Query: 185 ggtctcactaccaactcttccttcactctccctccagaaaaccatgcctgaccctgcacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtctcactaccaactcttccttcactctccctccagaaaaccatgcctgaccctgcacc 444
Query: 245 caggctcacagtcttaggtcatgccacacacatggtccctgcccacacagccaatgctca 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 caggctcacagtcttaggtcatgccacacacatggcccctgcccacacagccaatgctca 504
Query: 305 cacagccaatgcccacacagtcaatgcccacatagactcttcttattgcattcattgttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacagccaatgcccacacagtcaatgcccacatagactcttcttattgcattcattgttt 564
Query: 365 cagaaccacaatgccaagtgaagaccctacctcttgattttgcattaaatttaactcact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagaaccacaatgccaagtgaagaccctacctcttgattttgcattaaatttaactcact 624
Query: 425 tttcttactcttacagagcactggtacagagcccacattctgtttgtttgtttgttgttt 484
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttcttactcttacagagcacgggtacagagcccacattctgtttgtttgtttgttgttt 684
Query: 485 tttgagacagggtttttctgtgtagccctggctgtcctggaactcactttgtagaccagg 544
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcgagacagggtttttctgtgtagccctggctgtcctggaactcactttgtagaccagg 744
Query: 545 ctggcctcgaactcagagatccgcctgcctctgcctcccaagt 587
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctggcctcgaactcagagatccgcctgcctctgcctcccaagt 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_a16.g1 MSMg01no409_a16.g1 CHROMAT_FILE:
MSMg01no409_a16.g1 PHD_FILE: MSMg01no409_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:15 2005
(396 letters)
>mm_chr15_72994825_72995617
Length = 793
Score = 681 bits (352), Expect = 0.0
Identities = 384/396 (96%), Gaps = 3/396 (0%)
Strand = Plus / Minus
Query: 1 caagtatgtagctaactttatggggacccatgggccaggctggcagtttttccatattga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 caagtatgtagctaactttatggggacccatgggccaggctggcagtttttccatattga 534
Query: 61 gtgggtagcacaagaagtgtgtgtgtgtgtgtgttgtgttatcatggttggtctttgttt 120
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 533 gtgggtagcacaagaagtgtgtgtgtgtatg---tgtgttatcatggttggtctttgttt 477
Query: 121 gtgctcttgggggacggaattgcacatcacccgtgtaagtccatctactctgtgaattgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 476 gtgctcttgggggacggaattgcacatcacccgtgtaagtccatctactccgtgaattgt 417
Query: 181 tcttggttatcagaacccgtctggtctctggggtgaatcatagcatgcccatgctctgca 240
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tctgggtcatcagaacccgtctggtctctggggtgaatcatagcatgcccatgctctgca 357
Query: 241 agaattctttttctgtattgtttctccaggaggtaaatatggcactgccgagcactggtg 300
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 agaattcagcttcagtattgtttctccaggaggtaaatatggcactgccgagcactggtg 297
Query: 301 gtcagagggaggctgagcctgtctggcttagatgaagcactgtgctctgacccgcgcctg 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtcagagggaggctgagcctggctggcttagatgaagcactgtgctctgacccgcgcctg 237
Query: 361 gcattgcttgtgttgagtggatttccttcttgctgg 396
||||||||||||||||||||||||||||||||||||
Sbjct: 236 gcattgcttgtgttgagtggatttccttcttgctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 793
Length adjustment: 9
Effective length of query: 387
Effective length of database: 784
Effective search space: 303408
Effective search space used: 303408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
