Query= MSMg01no409_d19.b1 MSMg01no409_d19.b1 CHROMAT_FILE:
MSMg01no409_d19.b1 PHD_FILE: MSMg01no409_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:31 2005
(477 letters)
>mm_chr15_26160149_26161025
Length = 877
Score = 884 bits (457), Expect = 0.0
Identities = 469/473 (99%)
Strand = Plus / Minus
Query: 5 gaattcacatcagaatgtagcttcctgatattgatattcccactagaataaggaaaaagg 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gaattgacatcagaatgtagcttcctgatattgatattcccactagaataaggaaaaagg 618
Query: 65 caatgcatgctgtcccttatgccacagctgttcctgttatgtggcggtggcaaatggcac 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 caatgtatgctgtcccttatgccacagctgttcctgttatgtggcggtggcaaatggcac 558
Query: 125 tctcttcacacaaatgcttaactctatggctgtggctgcctctttaagatgtagacatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctcttcacacaaatgcttaactctatggctgtggctgcctctttaagatgtagacatta 498
Query: 185 taacagttgttcattcccaagagagggtagtataggcctatggatgtttgagtatgcaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 taacagttgttcattcccaagagagggtagtataggcctatggatgtttgagtatgcaaa 438
Query: 245 tagaaactttgtcctcataattaagatcacttccaaaccttgtgctagtaataggtcctg 304
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 437 tagaaactttgtcctcataattaagatcacttccaaaccttgtggtagtaatgggtcctg 378
Query: 305 attggtctccggcctcccactaactagcattggagaatcctcctaagctcctgggattca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 attggtctccggcctcccactaactagcattggagaatcctcctaagctcctgggattca 318
Query: 365 gtattcccttaactaaaatattggtcattgtggtccataccagatttcaattctcccagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gtattcccttaactaaaatattggtcattgtggtccataccagatttcaattctcccagt 258
Query: 425 gtctaacttccttcctcaaatcctgctgttaaattcttcaacaaaggctgagc 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtctaacttccttcctcaaatcctgctgttaaattcttcaacaaaggctgagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_d19.g1 MSMg01no409_d19.g1 CHROMAT_FILE:
MSMg01no409_d19.g1 PHD_FILE: MSMg01no409_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:31 2005
(459 letters)
>mm_chr15_26003617_26004478
Length = 862
Score = 795 bits (411), Expect = 0.0
Identities = 449/463 (96%), Gaps = 5/463 (1%)
Strand = Plus / Plus
Query: 1 taatgctactaaacttacaggatgctttatgcagaatcttctctgtgtcttcagagataa 60
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 taatgctactaaactttcaggatgctttatgcagagtcttctctgtgtcttcagagataa 260
Query: 61 ggatccagtcttcttctgggtatgggatgagagcatctttcatgggagggtctcctggca 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatccagtcttcgtctgggtatgggatgagagcatctttcatgggagggtctcctggca 320
Query: 121 gcagtagatggagatcagagaattctttccaggttttattacttgctgtgggagagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gcagtagatggagatcagagaattctttccaggttttattacttgctgtgggatagaaag 380
Query: 181 ggaaggtcagagagaactttatgttttgctgtg---tttttttttcccaaatgccaaggt 237
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 381 ggaaggtcagagagaactttatgttttgctgtgtttttttttttttccaaatgccaaggt 440
Query: 238 gccctcttttcaagaagtaaattagttacttagcgcaccgcagcaacaaaatacctaata 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccctcttttcaagaagtaaattagttacttagcgcaccgcagcaacaaaatacctaata 500
Query: 298 agaaaaacttaaataaggaagcactggggcctgagagatggcccagtggtaacagcgctt 357
||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 501 agagaaacttaaataaggaagcactggggtctgagagatggcccagtggttacagcgctt 560
Query: 358 gtttttcctgcagaccagattttggttcccagcagttgtactcagcagttcacattgcct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttttcctgcagaccagattttggttcccagcagttgtactcagcagttcacattgcct 620
Query: 418 gtaactgggggtggtgat-ggggagccaatacctttttcttgt 459
||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 621 gtaactgggggtggt-attggggagccaatacccttttcttgt 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 862
Length adjustment: 10
Effective length of query: 449
Effective length of database: 852
Effective search space: 382548
Effective search space used: 382548
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|