Query= MSMg01no409_g21.b1 MSMg01no409_g21.b1 CHROMAT_FILE:
MSMg01no409_g21.b1 PHD_FILE: MSMg01no409_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:47 2005
(476 letters)
>mm_chr15_66461246_66462121
Length = 876
Score = 905 bits (468), Expect = 0.0
Identities = 471/472 (99%)
Strand = Plus / Minus
Query: 5 gaattctggaaatttgggttcgaattccacgccccaaagggtaaatatatattgctgaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaattctggaaatttgggttcgaattccacgccccaaagggtaaatatatattgctgaat 617
Query: 65 tattaactgtcagtaaaaaaacatgctgtagccaactctacactgtggaggaagacccac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tattaactgtcagtaaaaaaacatgctgtagccaactctacactgtggaggaagacccac 557
Query: 125 cttcagggcctttgaacatttcaacacgaaggcctcaatctgttaacagataacctaaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cttcagggcctttgaacatttcaacacgaaggcctcaatctgttaacagataacctaaac 497
Query: 185 tgaccagtgatattcacaagccaagtgtctacttgactcaacgcagagatttcctagcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgaccagtgatattcacaagccaagtgtctacttgactcaacgcagagatttcctagcca 437
Query: 245 gtactgctagaatggaaagcacggcaatgtgttagacactaccttttgagggatggctaa 304
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtactgctagaatggaaagcagggcaatgtgttagacactaccttttgagggatggctaa 377
Query: 305 tgaaaaagaaaagctctctggcccatctgctaacacccacagtgatccagaactgcaggg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgaaaaagaaaagctctctggcccatctgctaacacccacagtgatccagaactgcaggg 317
Query: 365 cagaggttggttaagtacctggatcatgaagccattctcctcatccagttcacagataca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cagaggttggttaagtacctggatcatgaagccattctcctcatccagttcacagataca 257
Query: 425 gcgtacaatctcattaagagcatcgtcttcatcctgagactcctcaaaatta 476
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcgtacaatctcattaagagcatcgtcttcatcctgagactcctcaaaatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_g21.g1 MSMg01no409_g21.g1 CHROMAT_FILE:
MSMg01no409_g21.g1 PHD_FILE: MSMg01no409_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:47 2005
(464 letters)
>mm_chr15_66419528_66420391
Length = 864
Score = 859 bits (444), Expect = 0.0
Identities = 458/466 (98%), Gaps = 7/466 (1%)
Strand = Plus / Plus
Query: 1 cttaaatacagataatgcttgttttactgatattctaaaatgatattttaaaaattaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaatacagataatgcttgttttactgatattctaaaatgatattttaaaaattaatt 260
Query: 61 catcagacaatatttctggcatagctgcatgcctgttttctcatgccactgctctccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcagacaatatttctggcatagctgcatgcctgttttctcatgccactgctctccagg 320
Query: 121 gacagttagtagagcactgataggagtagtagattatcttatcttccagaagatatttgt 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacagttagtagagcactgatagtagtagtagattatcttatcttccagaagatatttgt 380
Query: 181 ccatgggcatctcttatgataaatatgaataatactataatcatatactattcaataaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatgggcatctcttatgataaatatgaataatactataatcatatactattcaataaat 440
Query: 241 ttatagaaatatctataatatag--tgatacttataaatgtataatgttatataagattt 298
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatagaaatatctataatatagagtgatacttataaatgtataatgttatataagattt 500
Query: 299 gtgttatagtatatattctatatatttagttatatgtttatacacacacaaacttacctt 358
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgttata-----tattctatatatttagttatatgtttatacacacacaaacttacctt 555
Query: 359 ttatttaaatacataagtaatacatattatatataatatgagtacatatgggaaaggtat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttatttaaatacataagtaatacatattatatataatatgagtacatatgggaaaggtat 615
Query: 419 attagtctagaataggtagaaacataataaagtctaaaagttcaat 464
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 attagtctagaataggtagaaacataataaagtctaaaagttcaat 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
