Query= MSMg01no409_m11.b1 MSMg01no409_m11.b1 CHROMAT_FILE:
MSMg01no409_m11.b1 PHD_FILE: MSMg01no409_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:16 2005
(597 letters)
>mm_chr15_59935034_59936030
Length = 997
Score = 1098 bits (568), Expect = 0.0
Identities = 589/600 (98%), Gaps = 8/600 (1%)
Strand = Plus / Minus
Query: 1 gccccaggcagtcacacactcctgaatccatcagttcttgttcttatatccagtgagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gccccaggcagtcacacactcctgaatccatcagttcttgttcttatatccagtgagagt 737
Query: 61 attttgacttcaaacatacaaaatcaaaagacaggcagagcaagccgtgcctcttgtaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 attttgacttcaaacatacaaaatcaaaagacaggcagagcaagccgtgcctcttgtaaa 677
Query: 121 accaagtttatcatgttaaaatgtgctccacagccctcagcttcagtccaactataacat 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 676 accaagtttatcatgttaaaatgtgctccacagccctcagcttcagtctaactataacat 617
Query: 181 caagaattacttcaggaggattattggtggttttttcctttaattaagtaaaaatataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 caagaattacttcaggaggattattggtggttttttcctttaattaagtaaaaatataaa 557
Query: 241 tgaaaagtgagtta----tttttactatgacctaatttaatccacgttaaagcctaagac 296
|||||||||||||| ||||||||||||||||||||||| |||||| |||||||
Sbjct: 556 tgaaaagtgagttacacc----tactatgacctaatttaatccaccttaaagtctaagac 501
Query: 297 aaaatctcatttgcatatcatgttttctttaactaaaagagggtccaaaaactgtacaga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaatctcatttgcatatcatgttttctttaactaaaagagggtccaaaaactgtacaga 441
Query: 357 ttccagaactgagactagctggatctgcctatttggggagttgactttgtgatttggagt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttccagaactgagactagctggatctgcctatttggggagttgactttgtgatttggagt 381
Query: 417 aagagcatgtgtttcataggacccctaagggcctgagaccctgctgagacgggctcagct 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagagcatgtgtttcataggacccctaagggcctgagaccctgctgagacgggctcagct 321
Query: 477 tcatcaggcacaggaggcctgtgccgtgtttctcacgctaactccattcattctataaaa 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcatcaggcacaggaggcctgtgccgtgtttctcacgctaactccattcattctataaaa 261
Query: 537 gccctgcttaggatgtcatacgaataatgaaatgaagaacagaggggcatgaaacggaac 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gccctgcttaggatgtcatacgaataatgaaatgaagaacagaggggcatgaaacggaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_m11.g1 MSMg01no409_m11.g1 CHROMAT_FILE:
MSMg01no409_m11.g1 PHD_FILE: MSMg01no409_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:16 2005
(544 letters)
>mm_chr15_59773401_59774344
Length = 944
Score = 1006 bits (520), Expect = 0.0
Identities = 538/544 (98%)
Strand = Plus / Plus
Query: 1 aggggcagaagtctcactgaagaagactcaagagaaaactggatggtagtgtagaaatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggggcagaagtctcactgaagaagactcaagagaaaactggatggtagtgtagaaatag 260
Query: 61 accctggctgcatattcagggagtgagcattgcatggtagcatggttgaatataaatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accctggctgcatattcagggagtgagcattgcatggtagcatggttgaatataaatgca 320
Query: 121 tggctttgaggaaaagatccatggcttaggaatgtgagtagacaaatgagaaggagcatg 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctttgaggaaaagttccatggcttaggaatgtgagtagacaaatgagaaggagcatg 380
Query: 181 tctgagataaattttgtttgattgtatatttactctatataacaattagtattaaactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgagataaattttgtttgattgtatatttactctatataacaattagtattaaactgt 440
Query: 241 cccttcattattttcacttcatcaccttagctgtaataattgctaacatatatattgctt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccttcattataagcacttcatcaccttagctgtaataattgctaacatatatattgctt 500
Query: 301 cttaagtgatttagagcattctagagccctctgtgtacatattatagttcacaaagtatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttaagtgatttagagcattctagagccctctgtgtacatattatagttcacaaagtatt 560
Query: 361 ctggttaatttttatttgttaattgaagcaaactggggtcacctgggaagaaagaacctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 ctggttaatttttatttgttaattgaagcaaactggggtcacctgggaagagagaacctc 620
Query: 421 agaagtacccactatgggcagtaccactcatgggcaggtggtcctggattgtataggaaa 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaagtgcccactatgggcagtaccactcatgggcaggtggtcctggattgtataggaaa 680
Query: 481 ggtaactgaaaaatccacaagggtgtaagcgaacaacagtgttctttcagcatctctgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtaactgaaaaatccacaagggtgtaagcgaacaacagtgttctttcagcatctctgct 740
Query: 541 ttgg 544
||||
Sbjct: 741 ttgg 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
