Query= MSMg01no412_b03.b1 MSMg01no412_b03.b1 CHROMAT_FILE:
MSMg01no412_b03.b1 PHD_FILE: MSMg01no412_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:19 2005
(527 letters)
>mm_chr15_4354349_4355275
Length = 927
Score = 640 bits (331), Expect = 0.0
Identities = 337/339 (99%)
Strand = Plus / Minus
Query: 189 aaggtcaaagctgggaaggatacagctacctgaccagttgagatggaaattttctgtcat 248
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 927 aaggtcaaagctgggaaggatacagctacctgaccagttgagatggaaagtttctgtcat 868
Query: 249 ttacccacatatcattacaatctagctgccaataaatatgagtggtcatcccacaatcac 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 ttacccacatatcattacaatctagctgccaataaatatgagtggtcatcccacaatcac 808
Query: 309 aagacacatcaatgaagcctctagcatgaaagaaagggaccatagaacatgaaaaaaaga 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 aagacacatcaatgaagcctctagcatgaaagaaagggaccatagaacatgaaaaaaaga 748
Query: 369 accgctaagaacacagatgaacacagtatttataaagaaacaaaaaatgttgacgaaatt 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 accgctaagaacacagatgaacacagtatttataaagaaacaaaaaatgttgacgaaatt 688
Query: 429 agcaaggaagcaatataaaataatctgagtgtcaaaaacctaagtttatagattaaaaga 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agcaaggaagcaatataaaataatctgagtgtcaaaaacctaagtttatagattaaaaga 628
Query: 489 aacaccaattacacatcaaaatgagtaaatgaaatgcct 527
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 627 aacaccaattacacatcaaagtgagtaaatgaaatgcct 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_b03.g1 MSMg01no412_b03.g1 CHROMAT_FILE:
MSMg01no412_b03.g1 PHD_FILE: MSMg01no412_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:19 2005
(431 letters)
>mm_chr15_4199034_4199864
Length = 831
Score = 636 bits (329), Expect = 0.0
Identities = 402/433 (92%), Gaps = 16/433 (3%)
Strand = Plus / Plus
Query: 1 ttggttttcatggttgtgggaagccattccggactccctggccatccggacagaaatcta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 213 ttggttttcatggttgtgggaagccattccagactccctggccatccggacggaaatctg 272
Query: 61 tgccaggcagtaaacaagcccatatttggtggatggctcacccttaatccctgattggct 120
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 273 tgccaggcagtaaacaagcccatatttggtggatggctcgtccttaatccct-attggct 331
Query: 121 gagcaagcctgcctggtgaggtgaggtgacctgtggtgattggttgaggcatggttgtgg 180
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 332 gagcaagcctgcctggtgaggtgatgtgacctgtggtgattggttgaggcgtggttgtgg 391
Query: 181 cttgagtggataaaaaacgcttgtaccccgag--gcgtgggggatttgaagagagaagtt 238
|||||||||||||||| ||||||||||||||| ||| || |||||||||| |||
Sbjct: 392 cttgagtggataaaaa-cgcttgtaccccgagaggcg--ggagatttgaaga---aag-- 443
Query: 239 gcctgagtaaactgcattaagaagaaccggtgattgcgttttccttgctggtcgagttgg 298
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 444 -----agtaaactgcattaagaagaaccggtgattacgttttccttgctggtcgagttgg 498
Query: 299 atgcaacacatggtaaattttttattttcacaccttaactatgtatatgtataaattgtt 358
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 499 acgcaacacatggtaaatttttcattttcacaccttaactatgtatatgtataaattgtt 558
Query: 359 ttacgttaactgtttttaaggaaatacacctgttttgatcaggtttatgctacccccatt 418
|||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 559 ttacattaactgtttttaaggaaatacgcctgttttgatcgggtttatgctacccccata 618
Query: 419 cagtttgctttgt 431
|||||||||||||
Sbjct: 619 cagtttgctttgt 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
