Query= MSMg01no413_d17.b1 MSMg01no413_d17.b1 CHROMAT_FILE:
MSMg01no413_d17.b1 PHD_FILE: MSMg01no413_d17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:51 2005
(323 letters)
>mm_chr15_86894617_86895339
Length = 723
Score = 441 bits (228), Expect = e-128
Identities = 284/326 (87%), Gaps = 37/326 (11%)
Strand = Plus / Minus
Query: 1 aagagaactgtcgagagaagagccatgcagcagatgtgtaaccaccaccaacatccagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aagagaactgtcgagagaagagccatgcagcagatgtgtaaccaccaccaacatccagac 612
Query: 61 catactcacacacaagggagcatgcacacatttcacaatgcttgcacacacacacacaca 120
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 catactcacacacaagggagcatgcacacatttcacaatgcttg---------------- 568
Query: 121 cacacacacacacaccacacacacacacacacaca----cacacgtgcacaaacgtgcac 176
|||||||||||||||||| || | ||||||||||||||||
Sbjct: 567 -----------------cacacacacacacacacatgtgcatatgtgcacaaacgtgcac 525
Query: 177 actatactcacagcaaatatcataactacccgtgtattacatgtaaacacatacacatgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 actatactcacagcaaatatcataactacccgtgtattacatgtaaacacatacacatgt 465
Query: 237 acaccccatctgcctacttatacacgagaatgggcatgaatgcacatcgtcaatgtgaca 296
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 464 acaccccatctgcctacacatacatgagaatgggcatgaatgcacatcgtcaatgtgaca 405
Query: 297 catgtatagaaacatgtacatatgag 322
||||||||||||||||||||||||||
Sbjct: 404 catgtatagaaacatgtacatatgag 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_d17.g1 MSMg01no413_d17.g1 CHROMAT_FILE:
MSMg01no413_d17.g1 PHD_FILE: MSMg01no413_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:51 2005
(479 letters)
>mm_chr15_86763619_86764497
Length = 879
Score = 872 bits (451), Expect = 0.0
Identities = 469/475 (98%)
Strand = Plus / Plus
Query: 1 agcatggcagtaggagaggggaaggcagtgtcttagatatctgtagtgttggagtagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcatggcagtaggagaggggaaggcagtgtcttagatatctgtagtgttggagtagttc 260
Query: 61 agtcatgctgtccaataactgcacctagcatcaattgcttgtttgagatgtgccaaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcatgctgtccaataactgcacctagcatcaattgcttgtttgagatgtgccaaatgc 320
Query: 121 cattccatgcttttcacatgagctgagccattccaatcttacaaggaatgtaacaggttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattccatgcttttcacatgagctgagccattccaatcttacaaggaatgtaacaggttt 380
Query: 181 atcagttactatttcacacattagaaatgacaccggtgagaccagggtcacgtggacaga 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 atcagttactatttcacacattagaaatgacaccggtgagagcagggtcacgtggacaga 440
Query: 241 gagatgttatcttcccacacatctcaagctgggagccaggttctgggcagagcagccttt 300
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagatgcgatcagcccacacatctcaagctgggagccaggttctgggcagagcagccttt 500
Query: 301 aagctggatgtggtctctgttctcagagcaagcagggtggggggtgtactgacagacaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagctggatgtggtctctgttctcagagcaagcagggtggggggtgtactgacagacaga 560
Query: 361 aaacctcatgaggtggcctcagtaatggaaggcttgggtaaaagggacaagtaccaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacctcatgaggtggcctcagtaatggaaggcttgggtaaaagggacaagtaccaggga 620
Query: 421 gggcttgagtgaaaggaacaaatatttaagaggcagaagtagtagcgaatgttga 475
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggtttgagtgaaaggaacaaatatttaagaggcagaagtagtagcgaatgttga 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
